Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS16825 and QEN71_RS16830 are separated by 13 nucleotidesQEN71_RS16830 and QEN71_RS16835 are separated by 77 nucleotidesQEN71_RS16835 and QEN71_RS16840 are separated by 40 nucleotidesQEN71_RS16840 and QEN71_RS16845 overlap by 4 nucleotides QEN71_RS16825: QEN71_RS16825 - arabinose ABC transporter substrate-binding protein, at 3,727,126 to 3,728,130 _RS16825 QEN71_RS16830: QEN71_RS16830 - L-arabinose ABC transporter ATP-binding protein AraG, at 3,728,144 to 3,729,706 _RS16830 QEN71_RS16835: QEN71_RS16835 - L-arabinose ABC transporter permease AraH, at 3,729,784 to 3,730,800 _RS16835 QEN71_RS16840: QEN71_RS16840 - M55 family metallopeptidase, at 3,730,841 to 3,731,665 _RS16840 QEN71_RS16845: QEN71_RS16845 - P1 family peptidase, at 3,731,662 to 3,732,720 _RS16845
Group Condition QEN71_RS16825 QEN71_RS16830 QEN71_RS16835 QEN71_RS16840 QEN71_RS16845
carbon source D-Xylose (C) -0.9 +0.1 -0.9 -0.4 -0.0
motility Motility_outer_sample -0.8 +0.0 -0.8 -0.0 -0.1
carbon source D,L-Malic Acid (C) -0.1 -0.1 -0.2 -1.2 +0.1
carbon source Fumaric (C) -0.2 -0.1 -0.5 -0.4 -0.2
motility Motility_outer_sample -0.6 -0.1 -0.3 -0.2 -0.2
motility Motility_outer_sample_with_outgrowth -0.5 -0.2 -0.3 -0.1 -0.1
motility Motility_outer_sample_with_outgrowth -0.4 -0.0 -0.6 -0.2 -0.1
carbon source D-Sorbitol (C) +0.0 -0.3 -0.8 +0.1 -0.1
carbon source L-Glutamic (C) -0.2 -0.0 -0.7 -0.0 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 +0.3 -0.2 -0.4 -0.6
carbon source L-Leucine (C) -0.3 +0.1 -0.3 -0.3 -0.1
carbon source L-Histidine (C) -0.1 -0.1 +0.2 -0.3 -0.4
carbon source L-Leucine (C) -0.4 -0.2 +0.1 -0.2 +0.2
carbon source L-Histidine (C) -0.3 +0.2 -0.2 -0.1 -0.2
stress LB_noSalt with Chloride 200 mM +0.4 -0.0 -0.6 -0.4 +0.0
stress LB_noSalt with Chloride 200 mM -0.4 -0.2 -0.0 -0.1 +0.3
carbon source D-Fructose (C) -0.5 +0.1 -0.2 -0.2 +0.2
carbon source D,L-Lactate (C) +0.2 +0.2 -0.2 -0.5 -0.1
carbon source L-Aspartic Acid (C) -0.3 -0.1 +0.3 -0.1 -0.3
carbon source D-Sorbitol (C) +0.4 -0.0 -0.3 -0.4 -0.1
coculture Psabiae_ML3b with MT81 +0.4 -0.2 -0.3 +0.1 -0.3
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 -0.1 -0.1 -0.3 +0.4
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.5 -0.1 -0.3 -0.1 -0.2
carbon source L-Rhamnose (C) +0.2 +0.2 -0.6 -0.1 +0.2
coculture Psabiae_ML3b with MT80 -0.3 -0.1 +0.9 -0.2 -0.3
stress LB_noSalt with Chloride 200 mM -0.3 +0.3 +0.1 -0.2 +0.1
supernatant Filtered_supernatant_MT71_in_LB -0.3 +0.2 +0.4 -0.1 -0.1
stress LB_noSalt with Cobalt chloride 0.25 mM +0.5 -0.3 -0.2 +0.1 +0.1
supernatant Filtered_supernatant_MT81_in_LB -0.3 -0.1 +0.7 -0.0 -0.1
carbon source Fumaric (C) -0.5 -0.0 +0.4 +0.1 +0.3
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