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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS16740 and QEN71_RS16745 are separated by 71 nucleotides
QEN71_RS16745 and QEN71_RS16750 are separated by 334 nucleotides
QEN71_RS16750 and QEN71_RS16755 are separated by 27 nucleotides
QEN71_RS16755 and QEN71_RS16760 are separated by 469 nucleotides
QEN71_RS16740: QEN71_RS16740 - hypothetical protein, at 3,708,386 to 3,709,036
_RS16740
QEN71_RS16745: QEN71_RS16745 - YSC84-related protein, at 3,709,108 to 3,709,695
_RS16745
QEN71_RS16750: QEN71_RS16750 - flagellar motor protein MotB, at 3,710,030 to 3,711,013
_RS16750
QEN71_RS16755: QEN71_RS16755 - flagellar motor stator protein MotA, at 3,711,041 to 3,711,910
_RS16755
QEN71_RS16760: QEN71_RS16760 - Fic family protein, at 3,712,380 to 3,713,552
_RS16760
Group
Condition
QEN71
_RS16740
QEN71
_RS16745
QEN71
_RS16750
QEN71
_RS16755
QEN71
_RS16760
motility
Motility_inner_sample
-0.0
-0.1
-0.2
-0.4
-0.1
supernatant
Filtered_supernatant_MT81_in_LB
+0.0
+0.0
-0.4
-0.5
+0.2
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.1
-0.1
-0.2
-0.5
+0.0
supernatant
Filtered_supernatant_MT71_in_LB
+0.1
+0.1
-0.4
-0.5
+0.3
motility
Motility_inner_sample
+0.1
+0.1
-0.0
-0.3
-0.2
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.3
+0.0
-0.3
-0.7
+0.3
carbon source
D-Sorbitol (C)
+0.0
+0.1
+0.1
-0.5
+0.0
stress
LB_noSalt with Chloride 200 mM
-0.0
+0.1
-0.3
-0.2
+0.1
carbon source
D-Sorbitol (C)
+0.1
-0.1
+0.1
-0.4
+0.1
stress
LB_noSalt with Chloride 200 mM
+0.0
+0.1
-0.2
-0.2
+0.2
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.3
-0.1
+0.1
-0.4
+0.0
carbon source
D,L-Lactate (C)
+0.0
+0.2
-0.1
-0.4
+0.2
motility
Motility_outer_sample_with_outgrowth
+0.2
+0.2
-0.1
-0.1
-0.2
motility
Motility_outer_sample
+0.1
+0.2
-0.2
-0.1
-0.0
motility
Motility_outer_sample
-0.0
+0.2
-0.1
-0.4
+0.2
stress
LB_noSalt with Chloride 200 mM
+0.1
+0.3
-0.2
-0.1
-0.0
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.0
+0.2
-0.1
-0.2
+0.1
carbon source
Fumaric (C)
+0.2
+0.1
-0.0
-0.3
+0.1
carbon source
D-Glucose (C)
+0.0
+0.1
+0.2
-0.4
+0.2
carbon source
2-Deoxy-D-Ribose (C)
+0.1
+0.1
-0.1
-0.4
+0.5
carbon source
Fumaric (C)
+0.1
+0.2
+0.1
-0.1
-0.1
motility
Motility_inner_sample_with_outgrowth
+0.1
+0.1
-0.1
-0.1
+0.2
motility
Motility_inner_sample_with_outgrowth
+0.1
+0.2
-0.1
-0.2
+0.3
carbon source
L-Aspartic Acid (C)
+0.2
+0.1
+0.2
-0.3
+0.2
motility
Motility_outer_sample_with_outgrowth
+0.3
+0.1
+0.1
-0.2
-0.1
carbon source
2-Deoxy-D-Ribose (C)
+0.1
+0.1
+0.2
-0.2
+0.3
motility
Motility_outer_sample_with_outgrowth
+0.3
+0.1
+0.0
-0.1
-0.0
carbon source
L-Histidine (C)
+0.3
+0.1
-0.0
-0.0
+0.2
motility
Motility_inner_sample
+0.1
+0.1
-0.1
+0.2
+0.4
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.2
+0.1
+0.3
-0.3
+0.7
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QEN71_RS16750
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