Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS16230 and QEN71_RS16235 are separated by 51 nucleotidesQEN71_RS16235 and QEN71_RS16240 are separated by 119 nucleotidesQEN71_RS16240 and QEN71_RS16245 are separated by 229 nucleotidesQEN71_RS16245 and QEN71_RS16250 are separated by 642 nucleotides QEN71_RS16230: QEN71_RS16230 - VOC family protein, at 3,608,891 to 3,609,310 _RS16230 QEN71_RS16235: QEN71_RS16235 - YciI family protein, at 3,609,362 to 3,609,775 _RS16235 QEN71_RS16240: QEN71_RS16240 - YciI family protein, at 3,609,895 to 3,610,251 _RS16240 QEN71_RS16245: QEN71_RS16245 - glycine zipper 2TM domain-containing protein, at 3,610,481 to 3,610,666 _RS16245 QEN71_RS16250: QEN71_RS16250 - porin, at 3,611,309 to 3,612,436 _RS16250
Group Condition QEN71_RS16230 QEN71_RS16235 QEN71_RS16240 QEN71_RS16245 QEN71_RS16250
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.6 -0.8 +0.2 -0.4 -0.2
carbon source D-Fructose (C) +0.2 +0.2 -0.3 -0.9 +0.0
carbon source 2-Deoxy-D-Ribose (C) +0.2 -0.4 -0.4 -0.1 -0.1
carbon source L-Rhamnose (C) -0.0 -0.4 +0.1 -0.3 +0.0
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.2 -0.3 -0.3 +0.0
stress LB_noSalt with Zinc 0.5 mM -0.2 -0.3 +0.1 -0.1 -0.1
carbon source D-Sorbitol (C) -0.0 -0.3 -0.2 +0.2 -0.0
carbon source D-Glucose (C) +0.3 +0.2 -0.2 -0.5 -0.1
supernatant Filtered_supernatant_MT71_in_LB -0.2 +0.2 -0.3 +0.2 -0.0
stress LB_noSalt with Zinc 0.5 mM -0.3 +0.2 -0.2 +0.1 -0.0
carbon source L-Histidine (C) -0.2 -0.3 +0.0 +0.2 +0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 +0.0 +0.4 -0.5 +0.1
supernatant Filtered_supernatant_MT183_in_LB +0.2 -0.1 +0.1 -0.3 +0.1
carbon source L-Histidine (C) +0.1 -0.2 +0.2 -0.1 -0.0
carbon source D-Sorbitol (C) -0.5 +0.1 +0.4 +0.3 +0.0
carbon source L-Glutamic (C) -0.1 -0.1 +0.2 +0.2 +0.1
stress LB_noSalt with Chloride 200 mM -0.3 -0.1 +0.3 +0.5 -0.0
motility Motility_inner_sample_with_outgrowth -0.1 +0.3 +0.1 +0.3 -0.0
carbon source D-Fructose (C) +0.4 -0.1 +0.3 -0.1 +0.1
carbon source Fumaric (C) -0.0 -0.1 +0.4 +0.4 -0.0
motility Motility_inner_sample +0.2 -0.1 +0.1 +0.5 -0.1
stress LB_noSalt with Chloride 200 mM -0.0 +0.2 +0.0 +0.4 +0.0
motility Motility_outer_sample -0.1 +0.3 +0.2 +0.3 -0.1
supernatant Filtered_supernatant_MT80_in_LB +0.1 +0.3 +0.1 +0.1 -0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 -0.1 +0.3 +0.1 +0.2
carbon source D-Glucose (C) +0.0 +0.3 -0.0 +0.4 +0.0
carbon source Fumaric (C) +0.2 +0.2 +0.3 +0.1 -0.0
carbon source succinate (C) -0.1 +0.1 +0.3 +0.5 +0.0
carbon source D,L-Malic Acid (C) -0.1 +0.1 +0.5 +0.3 +0.2
stress LB_noSalt with Cobalt chloride 0.25 mM +0.2 +0.3 +0.1 +0.4 -0.0
remove
QEN71_RS16230
plot		 remove
QEN71_RS16235
plot		 remove
QEN71_RS16240		 remove
QEN71_RS16245
plot		 remove
QEN71_RS16250
plot