Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS15040 and QEN71_RS15045 are separated by 309 nucleotidesQEN71_RS15045 and QEN71_RS15050 are separated by 75 nucleotidesQEN71_RS15050 and QEN71_RS15055 are separated by 283 nucleotidesQEN71_RS15055 and QEN71_RS15060 overlap by 8 nucleotides QEN71_RS15040: QEN71_RS15040 - hypothetical protein, at 3,348,380 to 3,348,559 _RS15040 QEN71_RS15045: QEN71_RS15045 - outer membrane protein assembly factor BamA, at 3,348,869 to 3,351,178 _RS15045 QEN71_RS15050: QEN71_RS15050 - response regulator transcription factor, at 3,351,254 to 3,352,078 _RS15050 QEN71_RS15055: QEN71_RS15055 - ATP-binding protein, at 3,352,362 to 3,353,906 _RS15055 QEN71_RS15060: QEN71_RS15060 - response regulator, at 3,353,899 to 3,354,663 _RS15060
Group Condition QEN71_RS15040 QEN71_RS15045 QEN71_RS15050 QEN71_RS15055 QEN71_RS15060
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.2 +0.1 -0.1 -0.7
motility Motility_inner_sample N.D. -0.1 -0.0 -0.3 -0.1
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.1 -0.2 -0.1 -0.1
motility Motility_inner_sample N.D. -0.1 +0.2 -0.3 -0.2
motility Motility_outer_sample N.D. +0.1 -0.2 -0.4 +0.1
carbon source Fumaric (C) N.D. -0.1 -0.4 +0.1 -0.0
stress LB_noSalt with Zinc 0.5 mM N.D. -0.1 +0.1 -0.2 -0.1
carbon source L-Histidine (C) N.D. -0.1 +0.1 +0.0 -0.2
carbon source L-Glutamic (C) N.D. +0.0 +0.1 +0.0 -0.4
stress LB_noSalt with Cobalt chloride 0.25 mM N.D. -0.2 +0.1 -0.1 -0.0
motility Motility_outer_sample N.D. -0.0 +0.1 +0.0 -0.4
carbon source casaminos (C) N.D. +0.1 -0.1 -0.1 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.2 -0.3 +0.2 -0.3
motility Motility_outer_sample_with_outgrowth N.D. +0.2 -0.1 -0.1 -0.2
coculture Psabiae_ML3b with MT80 N.D. -0.1 +0.2 -0.1 -0.1
supernatant Filtered_supernatant_MT183_in_LB N.D. +0.2 +0.1 -0.2 -0.2
carbon source succinate (C) N.D. -0.0 -0.2 +0.3 -0.1
carbon source L-Leucine (C) N.D. +0.2 -0.2 -0.1 +0.0
stress LB_noSalt with Cobalt chloride 0.25 mM N.D. +0.2 +0.0 -0.2 -0.0
carbon source L-Rhamnose (C) N.D. +0.1 +0.1 +0.1 -0.3
carbon source L-Rhamnose (C) N.D. -0.2 +0.1 +0.1 +0.1
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.2 +0.1 +0.1 +0.1
carbon source D,L-Malic Acid (C) N.D. +0.3 +0.0 -0.3 +0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.1 -0.1 +0.2 -0.1
carbon source D,L-Malic Acid (C) N.D. -0.2 +0.3 +0.2 -0.1
carbon source L-Leucine (C) N.D. +0.1 +0.2 -0.1 -0.0
carbon source D-Sorbitol (C) N.D. +0.4 -0.0 +0.0 -0.2
stress LB_noSalt with Chloride 200 mM N.D. +0.1 +0.2 +0.0 -0.1
coculture Psabiae_ML3b with MT81 N.D. -0.1 +0.3 +0.0 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.2 -0.2 +0.2 +0.4
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