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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS13835 and QEN71_RS13840 are separated by 1044 nucleotides
QEN71_RS13840 and QEN71_RS13845 are separated by 21 nucleotides
QEN71_RS13845 and QEN71_RS13850 are separated by 75 nucleotides
QEN71_RS13850 and QEN71_RS13855 are separated by 840 nucleotides
QEN71_RS13835: QEN71_RS13835 - polysaccharide biosynthesis tyrosine autokinase, at 3,086,228 to 3,088,570
_RS13835
QEN71_RS13840: QEN71_RS13840 - helix-turn-helix domain-containing protein, at 3,089,615 to 3,090,550
_RS13840
QEN71_RS13845: QEN71_RS13845 - ATP-grasp fold amidoligase family protein, at 3,090,572 to 3,091,582
_RS13845
QEN71_RS13850: QEN71_RS13850 - hypothetical protein, at 3,091,658 to 3,093,211
_RS13850
QEN71_RS13855: QEN71_RS13855 - helix-turn-helix domain-containing protein, at 3,094,052 to 3,095,107
_RS13855
Group
Condition
QEN71
_RS13835
QEN71
_RS13840
QEN71
_RS13845
QEN71
_RS13850
QEN71
_RS13855
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-2.1
-0.0
-0.1
-0.0
+0.1
carbon source
D-Fructose (C)
-0.9
-0.3
-0.1
-0.1
-0.2
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-1.0
-0.4
+0.1
-0.1
+0.3
stress
LB_noSalt with Chloride 200 mM
-0.9
-0.2
-0.1
-0.1
+0.2
carbon source
D-Glucose (C)
-0.8
-0.5
-0.0
-0.0
+0.3
stress
LB_noSalt with Cobalt chloride 0.25 mM
-0.5
-0.3
-0.2
-0.1
+0.2
motility
Motility_inner_sample_with_outgrowth
-0.7
-0.1
-0.1
-0.0
-0.0
motility
Motility_inner_sample
-0.5
+0.0
-0.1
-0.0
-0.3
motility
Motility_outer_sample_with_outgrowth
-0.8
-0.4
-0.1
-0.1
+0.4
motility
Motility_inner_sample_with_outgrowth
-0.7
-0.0
-0.3
+0.0
+0.1
motility
Motility_outer_sample_with_outgrowth
-0.5
-0.3
-0.1
-0.2
+0.3
supernatant
Filtered_supernatant_MT183_in_LB
-0.5
-0.4
-0.2
+0.1
+0.2
motility
Motility_outer_sample_with_outgrowth
-0.0
-0.7
-0.3
-0.1
+0.3
stress
LB_noSalt with Zinc 0.5 mM
-0.7
+0.2
-0.2
-0.0
+0.1
carbon source
L-Histidine (C)
-0.5
-0.1
-0.3
-0.0
+0.2
carbon source
D-Glucose (C)
-0.4
+0.1
-0.3
-0.1
+0.1
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.3
-0.2
-0.1
-0.1
-0.3
motility
Motility_inner_sample
-0.3
-0.2
-0.2
-0.1
+0.4
supernatant
Filtered_supernatant_MT80_in_LB
-0.1
-0.3
-0.1
-0.1
+0.3
carbon source
L-Glutamic (C)
-0.4
-0.2
-0.1
+0.1
+0.3
carbon source
2-Deoxy-D-Ribose (C)
-0.4
-0.1
-0.1
-0.0
+0.4
carbon source
L-Leucine (C)
-0.5
+0.1
+0.0
-0.0
+0.3
carbon source
D,L-Malic Acid (C)
-0.4
+0.1
-0.1
+0.1
+0.3
carbon source
succinate (C)
+0.2
-0.2
-0.1
-0.1
+0.4
carbon source
L-Leucine (C)
-0.3
+0.2
-0.0
+0.2
+0.4
carbon source
D-Sorbitol (C)
+0.5
+0.2
-0.1
-0.2
+0.2
carbon source
L-Histidine (C)
+0.4
+0.3
-0.2
-0.0
+0.1
carbon source
L-Aspartic Acid (C)
+0.7
+0.1
-0.2
+0.1
+0.2
carbon source
Fumaric (C)
+0.3
+0.4
-0.2
+0.1
+0.3
motility
Motility_outer_sample
+0.3
+0.5
+0.0
+0.0
+0.1
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QEN71_RS13845
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