Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS13300 and QEN71_RS13305 are separated by 154 nucleotidesQEN71_RS13305 and QEN71_RS13310 are separated by 29 nucleotidesQEN71_RS13310 and QEN71_RS13315 are separated by 685 nucleotidesQEN71_RS13315 and QEN71_RS13320 are separated by 178 nucleotides QEN71_RS13300: QEN71_RS13300 - carotenoid 1,2-hydratase, at 2,977,049 to 2,978,158 _RS13300 QEN71_RS13305: QEN71_RS13305 - DUF4148 domain-containing protein, at 2,978,313 to 2,978,624 _RS13305 QEN71_RS13310: QEN71_RS13310 - sorbosone dehydrogenase family protein, at 2,978,654 to 2,979,982 _RS13310 QEN71_RS13315: QEN71_RS13315 - TAXI family TRAP transporter solute-binding subunit, at 2,980,668 to 2,982,023 _RS13315 QEN71_RS13320: QEN71_RS13320 - tRNA-Val, at 2,982,202 to 2,982,278 _RS13320
Group Condition QEN71_RS13300 QEN71_RS13305 QEN71_RS13310 QEN71_RS13315 QEN71_RS13320
motility Motility_inner_sample_with_outgrowth +0.0 -1.2 -0.1 -0.0 N.D.
stress LB_noSalt with Cobalt chloride 0.25 mM -0.2 -1.1 +0.0 -0.0 N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.6 -0.5 -0.1 +0.0 N.D.
coculture Psabiae_ML3b with MT80 -0.1 -0.9 +0.1 -0.1 N.D.
motility Motility_inner_sample +0.1 -0.7 -0.1 -0.0 N.D.
carbon source succinate (C) -0.1 -0.5 -0.1 -0.0 N.D.
carbon source casaminos (C) -0.2 -0.4 -0.3 +0.1 N.D.
carbon source L-Histidine (C) -0.1 -0.8 -0.0 +0.1 N.D.
motility Motility_outer_sample_with_outgrowth +0.1 -0.6 -0.0 -0.2 N.D.
stress LB_noSalt with Chloride 200 mM -0.1 -0.3 -0.3 +0.1 N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.4 -0.2 +0.0 +0.0 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.1 -0.5 +0.0 +0.1 N.D.
motility Motility_outer_sample_with_outgrowth -0.2 -0.3 +0.1 +0.1 N.D.
carbon source Fumaric (C) -0.1 +0.3 -0.4 -0.1 N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.4 +0.5 +0.0 -0.0 N.D.
carbon source D-Glucose (C) -0.1 +0.4 +0.0 +0.0 N.D.
supernatant Filtered_supernatant_MT81_in_LB -0.0 +0.6 -0.1 -0.1 N.D.
stress LB_noSalt with Chloride 200 mM -0.2 +0.6 +0.0 +0.1 N.D.
carbon source D-Sorbitol (C) -0.3 +0.5 +0.2 +0.1 N.D.
carbon source D-Xylose (C) -0.1 +0.5 +0.0 +0.0 N.D.
supernatant Filtered_supernatant_MT71_in_LB +0.1 +0.4 -0.1 +0.1 N.D.
carbon source L-Rhamnose (C) -0.1 +0.7 -0.1 +0.0 N.D.
carbon source D,L-Malic Acid (C) +0.1 +0.5 +0.1 +0.0 N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 +0.5 +0.3 +0.0 N.D.
stress LB_noSalt with Cobalt chloride 0.25 mM +0.1 +0.5 +0.0 +0.0 N.D.
stress LB_noSalt with Chloride 200 mM +0.0 +0.5 -0.0 +0.1 N.D.
coculture Psabiae_ML3b with MT81 -0.0 +1.1 -0.2 +0.0 N.D.
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 +0.9 +0.1 -0.0 N.D.
carbon source L-Aspartic Acid (C) +0.1 +0.7 +0.1 +0.0 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.2 +0.9 +0.0 +0.1 N.D.
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