Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS13185 and QEN71_RS13190 are separated by 358 nucleotidesQEN71_RS13190 and QEN71_RS13195 are separated by 61 nucleotidesQEN71_RS13195 and QEN71_RS13200 are separated by 173 nucleotidesQEN71_RS13200 and QEN71_RS13205 are separated by 69 nucleotides QEN71_RS13185: QEN71_RS13185 - porin, at 2,951,726 to 2,952,850 _RS13185 QEN71_RS13190: QEN71_RS13190 - hypothetical protein, at 2,953,209 to 2,953,394 _RS13190 QEN71_RS13195: QEN71_RS13195 - 2-dehydropantoate 2-reductase, at 2,953,456 to 2,954,484 _RS13195 QEN71_RS13200: QEN71_RS13200 - fumarylacetoacetate hydrolase family protein, at 2,954,658 to 2,955,455 _RS13200 QEN71_RS13205: QEN71_RS13205 - formyl-CoA transferase, at 2,955,525 to 2,956,772 _RS13205
Group Condition QEN71_RS13185 QEN71_RS13190 QEN71_RS13195 QEN71_RS13200 QEN71_RS13205
motility Motility_outer_sample_with_outgrowth -0.9 N.D. -0.4 -0.4 -0.2
motility Motility_outer_sample_with_outgrowth -0.7 N.D. -0.3 -0.4 -0.1
motility Motility_outer_sample -0.5 N.D. -0.4 -0.1 -0.2
motility Motility_outer_sample_with_outgrowth -0.5 N.D. -0.2 -0.3 -0.2
motility Motility_outer_sample_with_outgrowth -0.5 N.D. -0.2 -0.3 +0.0
motility Motility_outer_sample -0.5 N.D. -0.2 -0.0 -0.2
motility Motility_inner_sample -0.1 N.D. -0.1 -0.3 -0.4
stress LB_noSalt with Cobalt chloride 0.25 mM +0.0 N.D. -0.2 -0.1 -0.2
motility Motility_inner_sample -0.1 N.D. -0.2 +0.0 -0.2
coculture Psabiae_ML3b with MT80 -0.1 N.D. -0.2 -0.1 -0.1
motility Motility_inner_sample_with_outgrowth -0.2 N.D. -0.1 -0.1 -0.1
motility Motility_inner_sample -0.1 N.D. -0.3 +0.1 -0.1
coculture Psabiae_ML3b with MT81 -0.1 N.D. -0.2 +0.1 -0.1
supernatant Filtered_supernatant_MT71_in_LB +0.1 N.D. -0.2 +0.1 -0.1
carbon source Fumaric (C) +0.1 N.D. +0.0 +0.1 -0.2
carbon source L-Leucine (C) +0.1 N.D. -0.1 -0.1 +0.2
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 N.D. +0.3 +0.1 -0.0
carbon source L-Histidine (C) +0.0 N.D. -0.1 +0.2 +0.1
carbon source L-Leucine (C) +0.1 N.D. -0.1 +0.1 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 N.D. +0.2 -0.1 +0.1
stress LB_noSalt with Zinc 0.5 mM +0.1 N.D. -0.1 +0.1 +0.3
carbon source D-Xylose (C) -0.1 N.D. +0.1 +0.1 +0.3
supernatant Filtered_supernatant_MT81_in_LB +0.1 N.D. +0.3 -0.1 +0.0
carbon source D,L-Malic Acid (C) +0.1 N.D. +0.2 -0.1 +0.1
carbon source succinate (C) -0.0 N.D. +0.2 +0.1 +0.1
carbon source D-Fructose (C) +0.1 N.D. +0.1 +0.2 +0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 N.D. +0.1 +0.1 +0.0
carbon source L-Histidine (C) +0.1 N.D. +0.1 +0.1 +0.2
stress LB_noSalt with Chloride 200 mM +0.2 N.D. +0.2 +0.3 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 N.D. +0.4 +0.2 +0.1
remove
QEN71_RS13185
plot		 remove
QEN71_RS13190
plot		 remove
QEN71_RS13195		 remove
QEN71_RS13200
plot		 remove
QEN71_RS13205
plot