Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS12575 and QEN71_RS12580 are separated by 341 nucleotidesQEN71_RS12580 and QEN71_RS12585 are separated by 6 nucleotidesQEN71_RS12585 and QEN71_RS12590 are separated by 70 nucleotidesQEN71_RS12590 and QEN71_RS12595 are separated by 446 nucleotides QEN71_RS12575: QEN71_RS12575 - glycine betaine/L-proline ABC transporter ATP-binding protein, at 2,813,187 to 2,814,491 _RS12575 QEN71_RS12580: QEN71_RS12580 - IlvD/Edd family dehydratase, at 2,814,833 to 2,816,545 _RS12580 QEN71_RS12585: QEN71_RS12585 - dihydrodipicolinate synthase family protein, at 2,816,552 to 2,817,484 _RS12585 QEN71_RS12590: QEN71_RS12590 - hypothetical protein, at 2,817,555 to 2,817,776 _RS12590 QEN71_RS12595: QEN71_RS12595 - response regulator transcription factor, at 2,818,223 to 2,818,876 _RS12595
Group Condition QEN71_RS12575 QEN71_RS12580 QEN71_RS12585 QEN71_RS12590 QEN71_RS12595
carbon source L-Aspartic Acid (C) -0.1 -0.3 -0.7 N.D. N.D.
carbon source succinate (C) -0.1 -0.4 -0.5 N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -0.2 -0.9 N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.1 -0.1 -0.8 N.D. N.D.
carbon source succinate (C) -0.8 -0.3 +0.2 N.D. N.D.
carbon source D-Fructose (C) +0.2 -0.4 -0.6 N.D. N.D.
carbon source L-Glutamic (C) -0.2 -0.1 -0.5 N.D. N.D.
supernatant Filtered_supernatant_MT80_in_LB -0.1 -0.2 -0.4 N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 +0.2 -0.8 N.D. N.D.
motility Motility_outer_sample_with_outgrowth -0.3 +0.1 -0.5 N.D. N.D.
carbon source D-Sorbitol (C) -0.1 -0.0 -0.5 N.D. N.D.
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 +0.1 -0.4 N.D. N.D.
motility Motility_outer_sample +0.0 -0.2 -0.4 N.D. N.D.
carbon source Fumaric (C) -0.2 +0.1 -0.3 N.D. N.D.
carbon source casaminos (C) +0.2 -0.1 -0.5 N.D. N.D.
stress LB_noSalt with Cobalt chloride 0.25 mM -0.1 +0.1 -0.4 N.D. N.D.
carbon source D,L-Malic Acid (C) -0.2 -0.3 +0.4 N.D. N.D.
carbon source L-Histidine (C) -0.4 -0.0 +0.2 N.D. N.D.
carbon source D,L-Lactate (C) +0.1 +0.3 -0.5 N.D. N.D.
motility Motility_inner_sample +0.2 +0.4 -0.6 N.D. N.D.
carbon source D,L-Malic Acid (C) +0.3 -0.1 -0.3 N.D. N.D.
carbon source D-Glucose (C) +0.3 +0.1 -0.4 N.D. N.D.
motility Motility_outer_sample -0.3 +0.1 +0.3 N.D. N.D.
stress LB_noSalt with Chloride 200 mM -0.3 +0.1 +0.4 N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 +0.5 -0.4 N.D. N.D.
supernatant Filtered_supernatant_MT71_in_LB -0.1 +0.2 +0.2 N.D. N.D.
motility Motility_outer_sample_with_outgrowth -0.1 +0.3 +0.3 N.D. N.D.
carbon source D,L-Lactate (C) -0.0 +0.2 +0.3 N.D. N.D.
stress LB_noSalt with Chloride 200 mM +0.3 +0.1 +0.3 N.D. N.D.
motility Motility_outer_sample_with_outgrowth +0.1 +0.3 +0.2 N.D. N.D.
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