Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS11280 and QEN71_RS11285 are separated by 91 nucleotidesQEN71_RS11285 and QEN71_RS11290 are separated by 213 nucleotidesQEN71_RS11290 and QEN71_RS11295 are separated by 89 nucleotidesQEN71_RS11295 and QEN71_RS11300 are separated by 219 nucleotides QEN71_RS11280: QEN71_RS11280 - GlxA family transcriptional regulator, at 2,506,448 to 2,507,419 _RS11280 QEN71_RS11285: QEN71_RS11285 - sensor histidine kinase, at 2,507,511 to 2,508,635 _RS11285 QEN71_RS11290: QEN71_RS11290 - hypothetical protein, at 2,508,849 to 2,509,040 _RS11290 QEN71_RS11295: QEN71_RS11295 - DUF1223 domain-containing protein, at 2,509,130 to 2,509,849 _RS11295 QEN71_RS11300: QEN71_RS11300 - MFS transporter, at 2,510,069 to 2,511,364 _RS11300
Group Condition QEN71_RS11280 QEN71_RS11285 QEN71_RS11290 QEN71_RS11295 QEN71_RS11300
carbon source D-Xylose (C) -0.3 +0.3 -1.9 -1.0 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 -0.2 -0.4 -0.4 -0.1
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.3 -0.6 -0.3 -0.1
motility Motility_outer_sample_with_outgrowth -0.1 -0.1 -0.6 -0.2 -0.1
carbon source 2-Deoxy-D-Ribose (C) +0.1 +0.2 -0.8 -0.4 -0.1
motility Motility_outer_sample_with_outgrowth -0.0 -0.7 +0.1 -0.0 -0.3
carbon source L-Histidine (C) -0.1 +0.3 -0.7 -0.4 +0.0
carbon source D-Glucose (C) -0.2 +0.2 -0.3 -0.2 -0.3
carbon source D-Glucose (C) -0.0 +0.3 -0.7 -0.2 -0.2
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.2 -1.0 -0.0 +0.0
carbon source L-Histidine (C) +0.1 +0.2 -0.6 -0.4 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 -0.1 +0.3 -0.3 -0.0
carbon source L-Leucine (C) +0.3 +0.2 -0.2 -0.4 -0.2
carbon source L-Leucine (C) -0.2 +0.5 -0.3 -0.1 -0.1
motility Motility_outer_sample_with_outgrowth -0.3 +0.5 -0.2 -0.1 -0.2
supernatant Filtered_supernatant_MT183_in_LB -0.5 +0.4 +0.1 -0.0 +0.0
carbon source D-Sorbitol (C) +0.1 +0.4 -0.2 -0.2 -0.2
motility Motility_outer_sample -0.6 +0.5 +0.1 -0.1 +0.2
stress LB_noSalt with Cobalt chloride 0.25 mM +0.4 -0.4 -0.0 +0.1 +0.1
carbon source L-Aspartic Acid (C) +0.3 -0.3 +0.2 +0.2 +0.1
carbon source L-Glutamic (C) +0.4 +0.2 -0.3 +0.1 +0.1
stress LB_noSalt with Chloride 200 mM +0.3 +0.2 +0.3 +0.1 -0.2
carbon source Fumaric (C) +0.1 +0.4 -0.2 +0.1 +0.3
carbon source L-Aspartic Acid (C) +0.4 +0.4 +0.1 +0.1 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.5 -0.0 +0.2 +0.4 -0.1
carbon source D,L-Malic Acid (C) -0.0 +0.3 +0.4 +0.3 +0.1
stress LB_noSalt with Chloride 200 mM +0.7 -0.3 +0.5 +0.4 +0.2
stress LB_noSalt with Chloride 200 mM +1.2 +0.4 +0.2 +0.7 +0.0
stress LB_noSalt with Zinc 0.5 mM +1.9 +0.3 +0.3 +0.3 +0.0
stress LB_noSalt with Zinc 0.5 mM +1.7 +0.1 +0.6 +0.2 +0.3
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