Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS10865 and QEN71_RS10870 are separated by 16 nucleotidesQEN71_RS10870 and QEN71_RS10875 are separated by 1412 nucleotidesQEN71_RS10875 and QEN71_RS10880 are separated by 164 nucleotidesQEN71_RS10880 and QEN71_RS10885 are separated by 329 nucleotides QEN71_RS10865: QEN71_RS10865 - GT4 family glycosyltransferase PelF, at 2,411,071 to 2,412,654 _RS10865 QEN71_RS10870: QEN71_RS10870 - exopolysaccharide Pel transporter PelG, at 2,412,671 to 2,414,041 _RS10870 QEN71_RS10875: QEN71_RS10875 - IS481 family transposase, at 2,415,454 to 2,416,593 _RS10875 QEN71_RS10880: QEN71_RS10880 - aldo/keto reductase, at 2,416,758 to 2,417,801 _RS10880 QEN71_RS10885: QEN71_RS10885 - DEAD/DEAH box helicase, at 2,418,131 to 2,422,624 _RS10885
Group Condition QEN71_RS10865 QEN71_RS10870 QEN71_RS10875 QEN71_RS10880 QEN71_RS10885
carbon source L-Rhamnose (C) -0.4 -0.2 N.D. -0.3 +0.0
motility Motility_inner_sample -0.5 -0.1 N.D. -0.1 -0.0
carbon source L-Aspartic Acid (C) -0.5 -0.1 N.D. -0.1 -0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 -0.3 N.D. -0.2 -0.0
carbon source 2-Deoxy-D-Ribose (C) -0.3 -0.1 N.D. -0.1 -0.0
carbon source succinate (C) -0.4 -0.2 N.D. -0.0 -0.1
stress LB_noSalt with Chloride 200 mM -0.5 -0.2 N.D. +0.1 +0.0
supernatant Filtered_supernatant_MT80_in_LB -0.2 -0.1 N.D. -0.2 -0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 -0.1 N.D. -0.4 +0.1
stress LB_noSalt with Chloride 200 mM -0.6 -0.1 N.D. +0.1 +0.1
carbon source L-Rhamnose (C) -0.3 -0.1 N.D. -0.0 -0.1
stress LB_noSalt with Chloride 200 mM -0.1 -0.0 N.D. -0.3 -0.0
carbon source D-Sorbitol (C) -0.5 +0.0 N.D. +0.1 -0.1
motility Motility_inner_sample -0.4 +0.1 N.D. +0.1 -0.1
carbon source succinate (C) -0.4 -0.1 N.D. +0.1 +0.0
motility Motility_inner_sample_with_outgrowth -0.3 +0.1 N.D. +0.0 -0.1
carbon source L-Aspartic Acid (C) -0.4 -0.0 N.D. +0.1 +0.0
stress LB_noSalt with Zinc 0.5 mM +0.1 +0.2 N.D. -0.4 -0.1
coculture Psabiae_ML3b with MT81 -0.3 -0.0 N.D. +0.1 -0.0
carbon source D,L-Malic Acid (C) -0.4 -0.0 N.D. +0.1 -0.0
coculture Psabiae_ML3b with MT80 -0.3 -0.0 N.D. +0.2 -0.1
motility Motility_inner_sample_with_outgrowth -0.3 +0.1 N.D. +0.0 -0.1
supernatant Filtered_supernatant_MT81_in_LB -0.3 -0.1 N.D. +0.1 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 +0.0 N.D. +0.1 -0.1
motility Motility_outer_sample_with_outgrowth -0.3 +0.1 N.D. -0.1 +0.1
motility Motility_outer_sample -0.4 +0.2 N.D. +0.1 -0.0
carbon source L-Leucine (C) -0.3 +0.2 N.D. -0.0 +0.0
carbon source D,L-Lactate (C) -0.2 +0.0 N.D. +0.0 +0.1
carbon source D-Xylose (C) +0.2 +0.1 N.D. -0.2 -0.0
stress LB_noSalt with Cobalt chloride 0.25 mM -0.1 +0.3 N.D. -0.1 +0.1
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