Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS10440 and QEN71_RS10445 are separated by 4 nucleotidesQEN71_RS10445 and QEN71_RS10450 are separated by 14 nucleotidesQEN71_RS10450 and QEN71_RS10455 are separated by 30 nucleotidesQEN71_RS10455 and QEN71_RS10460 are separated by 158 nucleotides QEN71_RS10440: QEN71_RS10440 - respiratory nitrate reductase subunit gamma, at 2,315,565 to 2,316,248 _RS10440 QEN71_RS10445: QEN71_RS10445 - peptidylprolyl isomerase, at 2,316,253 to 2,317,032 _RS10445 QEN71_RS10450: QEN71_RS10450 - nitrate/nitrite transporter, at 2,317,047 to 2,318,309 _RS10450 QEN71_RS10455: QEN71_RS10455 - LysR family transcriptional regulator, at 2,318,340 to 2,319,263 _RS10455 QEN71_RS10460: QEN71_RS10460 - benzoate 1,2-dioxygenase large subunit, at 2,319,422 to 2,320,789 _RS10460
Group Condition QEN71_RS10440 QEN71_RS10445 QEN71_RS10450 QEN71_RS10455 QEN71_RS10460
carbon source L-Leucine (C) -2.3 N.D. -0.1 -0.4 -0.1
carbon source Fumaric (C) -2.2 N.D. -0.1 +0.3 -0.4
carbon source L-Glutamic (C) -1.5 N.D. -0.3 -0.2 -0.2
motility Motility_outer_sample_with_outgrowth -0.5 N.D. -1.0 -0.3 -0.2
carbon source D-Sorbitol (C) +0.4 N.D. -0.3 -1.0 -0.8
stress LB_noSalt with Chloride 200 mM -1.2 N.D. -0.6 +0.3 -0.1
carbon source L-Glutamic (C) -1.3 N.D. -0.5 -0.1 +0.5
stress LB_noSalt with Chloride 200 mM -1.2 N.D. -0.0 -0.4 +0.2
motility Motility_outer_sample_with_outgrowth -1.1 N.D. +0.1 -0.4 +0.2
motility Motility_outer_sample -0.5 N.D. -0.6 -0.1 +0.1
carbon source L-Rhamnose (C) -1.0 N.D. +0.7 -0.3 -0.3
carbon source D-Glucose (C) -1.5 N.D. +0.5 -0.1 +0.3
carbon source D,L-Malic Acid (C) -0.4 N.D. +0.3 +0.0 -0.6
stress LB_noSalt with Zinc 0.5 mM -0.3 N.D. -0.8 +0.2 +0.4
motility Motility_outer_sample_with_outgrowth -0.5 N.D. +0.2 -0.3 +0.3
carbon source Fumaric (C) -1.0 N.D. +0.5 +0.2 +0.1
stress LB_noSalt with Zinc 0.5 mM -0.5 N.D. -0.5 +0.4 +0.4
carbon source D,L-Malic Acid (C) -0.8 N.D. +0.4 +0.4 +0.1
carbon source succinate (C) -0.4 N.D. +0.7 -0.3 +0.2
carbon source D-Sorbitol (C) +0.9 N.D. +0.2 -0.5 -0.4
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.7 N.D. +0.3 -0.0 -0.7
carbon source L-Rhamnose (C) -0.4 N.D. +0.3 +0.3 +0.1
carbon source D,L-Lactate (C) -0.1 N.D. +0.5 -0.3 +0.3
carbon source D-Fructose (C) +0.1 N.D. +0.6 +0.5 -0.7
carbon source casaminos (C) +0.6 N.D. +0.5 -0.2 -0.2
carbon source casaminos (C) -0.2 N.D. +0.5 +0.3 +0.3
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +1.4 N.D. +0.1 -0.5 +0.2
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.5 N.D. +0.6 -0.0 +0.4
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.5 N.D. +1.1 -0.2 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.7 N.D. +1.2 +0.1 -0.2
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