Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS09955 and QEN71_RS09960 are separated by 109 nucleotidesQEN71_RS09960 and QEN71_RS09965 are separated by 140 nucleotidesQEN71_RS09965 and QEN71_RS09970 are separated by 142 nucleotidesQEN71_RS09970 and QEN71_RS09975 are separated by 22 nucleotides QEN71_RS09955: QEN71_RS09955 - 1-aminocyclopropane-1-carboxylate deaminase, at 2,216,346 to 2,217,362 _RS09955 QEN71_RS09960: QEN71_RS09960 - DUF4410 domain-containing protein, at 2,217,472 to 2,218,239 _RS09960 QEN71_RS09965: QEN71_RS09965 - hypothetical protein, at 2,218,380 to 2,218,709 _RS09965 QEN71_RS09970: QEN71_RS09970 - branched-chain amino acid ABC transporter substrate-binding protein, at 2,218,852 to 2,220,000 _RS09970 QEN71_RS09975: QEN71_RS09975 - ATP-binding sensor histidine kinase, at 2,220,023 to 2,225,611 _RS09975
Group Condition QEN71_RS09955 QEN71_RS09960 QEN71_RS09965 QEN71_RS09970 QEN71_RS09975
carbon source D,L-Malic Acid (C) -0.2 -0.0 -0.7 -0.9 -0.1
carbon source succinate (C) -0.4 -0.2 -0.4 -0.6 -0.0
carbon source D-Sorbitol (C) -0.8 -0.1 -0.0 -0.4 -0.2
carbon source D-Sorbitol (C) -0.3 -0.3 -0.5 -0.2 -0.1
carbon source D-Xylose (C) -0.5 -0.1 -0.3 -0.5 -0.0
carbon source D-Fructose (C) -0.5 -0.2 +0.0 -0.5 -0.1
stress LB_noSalt with Chloride 200 mM -0.4 +0.1 -0.5 -0.2 -0.1
carbon source L-Leucine (C) -0.3 +0.1 -0.1 -0.7 -0.1
carbon source succinate (C) +0.1 +0.1 -0.5 -0.7 -0.1
carbon source D,L-Malic Acid (C) -0.2 +0.2 -0.5 -0.5 -0.0
carbon source 2-Deoxy-D-Ribose (C) -0.4 +0.1 +0.1 -0.7 -0.0
stress LB_noSalt with Chloride 200 mM -0.3 +0.1 -0.3 -0.2 -0.1
carbon source L-Histidine (C) -0.0 +0.0 -0.1 -0.6 -0.1
carbon source L-Histidine (C) -0.4 -0.1 +0.1 -0.3 +0.0
carbon source Fumaric (C) -0.6 -0.2 -0.1 +0.4 -0.2
motility Motility_inner_sample +0.1 +0.1 -0.4 -0.2 -0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.5 -0.2 +0.0 +0.2 -0.1
carbon source D-Glucose (C) -0.5 -0.3 +0.3 +0.3 -0.1
stress LB_noSalt with Cobalt chloride 0.25 mM -0.1 +0.2 +0.0 -0.3 -0.2
coculture Psabiae_ML3b with MT80 -0.4 +0.2 -0.2 +0.2 -0.0
stress LB_noSalt with Chloride 200 mM -0.3 -0.0 +0.3 -0.3 -0.0
coculture Psabiae_ML3b with MT81 -0.0 +0.4 -0.3 -0.3 +0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 -0.2 +0.0 +0.4 -0.1
motility Motility_outer_sample -0.3 -0.1 -0.1 +0.5 -0.0
supernatant Filtered_supernatant_MT71_in_LB -0.3 +0.2 -0.1 +0.2 -0.1
motility Motility_outer_sample_with_outgrowth -0.1 +0.0 -0.3 +0.6 -0.2
carbon source L-Glutamic (C) -0.3 -0.0 -0.1 +0.6 +0.0
carbon source L-Leucine (C) -0.1 -0.1 +0.1 +0.6 -0.1
motility Motility_outer_sample_with_outgrowth +0.2 +0.0 -0.2 +0.5 +0.0
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 +0.7 +0.8 +0.5 +0.1
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