Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS09765 and QEN71_RS09770 are separated by 245 nucleotidesQEN71_RS09770 and QEN71_RS09775 are separated by 12 nucleotidesQEN71_RS09775 and QEN71_RS09780 are separated by 36 nucleotidesQEN71_RS09780 and QEN71_RS09785 are separated by 9 nucleotides QEN71_RS09765: QEN71_RS09765 - NAD-dependent succinate-semialdehyde dehydrogenase, at 2,178,072 to 2,179,520 _RS09765 QEN71_RS09770: QEN71_RS09770 - PaaI family thioesterase, at 2,179,766 to 2,180,146 _RS09770 QEN71_RS09775: QEN71_RS09775 - substrate-binding domain-containing protein, at 2,180,159 to 2,181,172 _RS09775 QEN71_RS09780: QEN71_RS09780 - ABC transporter ATP-binding protein, at 2,181,209 to 2,182,300 _RS09780 QEN71_RS09785: QEN71_RS09785 - carbohydrate ABC transporter permease, at 2,182,310 to 2,183,224 _RS09785
Group Condition QEN71_RS09765 QEN71_RS09770 QEN71_RS09775 QEN71_RS09780 QEN71_RS09785
coculture Psabiae_ML3b with MT81 -0.6 -0.0 -0.3 +0.4 -0.0
carbon source D,L-Malic Acid (C) -0.0 +0.3 -0.5 +0.0 -0.3
carbon source D-Glucose (C) -0.4 +0.1 -0.3 +0.3 -0.1
carbon source L-Histidine (C) +0.4 +0.0 -0.4 +0.1 -0.4
carbon source L-Rhamnose (C) +0.4 -0.1 -0.4 +0.1 -0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.5 +0.4 -0.5 -0.3 -0.3
stress LB_noSalt with Cobalt chloride 0.25 mM -0.6 +0.3 -0.4 +0.4 +0.3
carbon source L-Leucine (C) +0.2 +0.0 -0.7 +0.1 +0.2
stress LB_noSalt with Cobalt chloride 0.25 mM -0.3 +0.3 -0.4 -0.0 +0.3
motility Motility_outer_sample_with_outgrowth -0.2 +0.2 -0.6 +0.4 +0.2
stress LB_noSalt with Chloride 200 mM -0.3 +0.3 -0.3 +0.6 +0.1
motility Motility_inner_sample_with_outgrowth +0.0 +0.2 -0.7 +0.6 +0.4
motility Motility_inner_sample +0.2 +0.2 -0.5 +0.3 +0.3
motility Motility_outer_sample +0.3 +0.0 -0.2 +0.7 -0.2
carbon source Fumaric (C) +0.3 +0.2 -0.3 +0.1 +0.4
carbon source D-Sorbitol (C) -0.2 -0.1 +2.0 -0.2 -0.7
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.6 +0.3 -0.5 -0.1 +0.4
carbon source D-Fructose (C) +0.3 +0.3 -0.2 +0.2 +0.2
motility Motility_inner_sample +0.6 +0.0 -0.4 +0.4 +0.3
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.6 +0.0 -0.3 +0.0 +0.6
stress LB_noSalt with Zinc 0.5 mM +0.1 +0.1 -0.5 +0.5 +0.9
carbon source D-Sorbitol (C) +0.3 -0.1 +1.7 -0.4 -0.3
motility Motility_outer_sample_with_outgrowth -0.2 +0.2 +0.1 +0.8 +0.3
motility Motility_inner_sample +0.4 +0.2 -0.2 +0.5 +0.4
motility Motility_outer_sample -0.1 +0.3 -0.3 +0.9 +0.5
motility Motility_inner_sample_with_outgrowth +0.8 +0.2 -0.7 +0.5 +0.7
motility Motility_outer_sample_with_outgrowth +0.6 -0.1 -0.3 +0.6 +0.6
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 -0.1 +0.7 +0.3 +0.3
stress LB_noSalt with Zinc 0.5 mM +0.4 +0.1 -0.4 +0.8 +0.9
motility Motility_outer_sample_with_outgrowth +0.5 +0.1 +0.1 +0.6 +0.5
remove
QEN71_RS09765
plot		 remove
QEN71_RS09770
plot		 remove
QEN71_RS09775		 remove
QEN71_RS09780
plot		 remove
QEN71_RS09785
plot