Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS09465 and QEN71_RS09470 are separated by 39 nucleotidesQEN71_RS09470 and QEN71_RS09475 are separated by 141 nucleotidesQEN71_RS09475 and QEN71_RS09480 are separated by 126 nucleotidesQEN71_RS09480 and QEN71_RS09485 are separated by 127 nucleotides QEN71_RS09465: QEN71_RS09465 - RHS repeat-associated core domain-containing protein, at 2,116,228 to 2,120,940 _RS09465 QEN71_RS09470: QEN71_RS09470 - hypothetical protein, at 2,120,980 to 2,121,264 _RS09470 QEN71_RS09475: QEN71_RS09475 - hypothetical protein, at 2,121,406 to 2,121,726 _RS09475 QEN71_RS09480: QEN71_RS09480 - nitroreductase, at 2,121,853 to 2,122,536 _RS09480 QEN71_RS09485: QEN71_RS09485 - GntR family transcriptional regulator, at 2,122,664 to 2,123,395 _RS09485
Group Condition QEN71_RS09465 QEN71_RS09470 QEN71_RS09475 QEN71_RS09480 QEN71_RS09485
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 -5.6 +0.1 -0.2 -2.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 -5.0 -0.2 +0.5 -1.9
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 -5.0 +0.5 -0.0 -1.8
carbon source D-Xylose (C) -0.0 -5.5 +0.2 +0.5 +0.4
carbon source D-Fructose (C) +0.1 -4.1 +0.1 -0.2 -0.3
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 -2.9 +0.4 +0.1 -2.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 -3.0 +0.4 +0.3 -1.9
carbon source D-Glucose (C) +0.0 -3.6 +0.2 +0.2 -0.2
carbon source D-Sorbitol (C) -0.0 -3.0 +0.4 -0.2 -0.4
carbon source L-Rhamnose (C) -0.0 -2.5 +0.2 +0.0 -0.6
carbon source D-Sorbitol (C) -0.0 -3.0 +0.2 +0.1 -0.0
carbon source D-Glucose (C) -0.0 -1.8 -0.1 +0.2 -0.4
carbon source L-Rhamnose (C) -0.0 -2.2 +0.2 +0.4 -0.5
motility Motility_outer_sample_with_outgrowth +0.0 -2.2 -0.1 +0.5 -0.3
carbon source 2-Deoxy-D-Ribose (C) +0.0 -1.4 +0.2 +0.1 -0.4
carbon source D-Fructose (C) +0.0 -1.1 +0.1 +0.1 -0.6
motility Motility_inner_sample_with_outgrowth -0.1 -1.5 +0.3 +0.0 -0.1
carbon source L-Leucine (C) -0.0 -1.6 +0.2 +0.4 -0.1
motility Motility_outer_sample_with_outgrowth +0.0 -1.0 -0.0 +0.3 -0.4
motility Motility_outer_sample_with_outgrowth -0.0 -0.9 -0.2 +0.3 -0.3
carbon source Fumaric (C) -0.0 -1.4 +0.2 +0.2 -0.1
carbon source L-Histidine (C) +0.1 -1.9 +0.1 +0.3 +0.7
carbon source L-Aspartic Acid (C) +0.0 -1.2 +0.2 +0.4 -0.0
motility Motility_inner_sample -0.1 -0.9 -0.0 +0.6 -0.1
carbon source succinate (C) -0.0 -1.2 +0.6 +0.2 +0.0
carbon source L-Histidine (C) -0.0 -1.3 +0.3 +0.1 +0.6
stress LB_noSalt with Chloride 200 mM -0.0 -0.6 +0.1 +0.4 +2.0
stress LB_noSalt with Chloride 200 mM -0.1 +0.4 +0.0 +0.3 +1.9
stress LB_noSalt with Zinc 0.5 mM -0.0 +0.2 +0.1 +0.2 +2.9
stress LB_noSalt with Zinc 0.5 mM -0.1 +0.2 +0.2 +0.4 +3.0
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