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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS09460 and QEN71_RS09465 are separated by 31 nucleotides
QEN71_RS09465 and QEN71_RS09470 are separated by 39 nucleotides
QEN71_RS09470 and QEN71_RS09475 are separated by 141 nucleotides
QEN71_RS09475 and QEN71_RS09480 are separated by 126 nucleotides
QEN71_RS09460: QEN71_RS09460 - hypothetical protein, at 2,115,642 to 2,116,196
_RS09460
QEN71_RS09465: QEN71_RS09465 - RHS repeat-associated core domain-containing protein, at 2,116,228 to 2,120,940
_RS09465
QEN71_RS09470: QEN71_RS09470 - hypothetical protein, at 2,120,980 to 2,121,264
_RS09470
QEN71_RS09475: QEN71_RS09475 - hypothetical protein, at 2,121,406 to 2,121,726
_RS09475
QEN71_RS09480: QEN71_RS09480 - nitroreductase, at 2,121,853 to 2,122,536
_RS09480
Group
Condition
QEN71
_RS09460
QEN71
_RS09465
QEN71
_RS09470
QEN71
_RS09475
QEN71
_RS09480
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
-0.0
-5.6
+0.1
-0.2
carbon source
D-Xylose (C)
N.D.
-0.0
-5.5
+0.2
+0.5
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
+0.0
-5.0
-0.2
+0.5
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
-0.1
-5.0
+0.5
-0.0
carbon source
D-Fructose (C)
N.D.
+0.1
-4.1
+0.1
-0.2
carbon source
D-Glucose (C)
N.D.
+0.0
-3.6
+0.2
+0.2
carbon source
D-Sorbitol (C)
N.D.
-0.0
-3.0
+0.4
-0.2
carbon source
D-Sorbitol (C)
N.D.
-0.0
-3.0
+0.2
+0.1
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
+0.0
-2.9
+0.4
+0.1
carbon source
L-Rhamnose (C)
N.D.
-0.0
-2.5
+0.2
+0.0
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
+0.0
-3.0
+0.4
+0.3
carbon source
D-Glucose (C)
N.D.
-0.0
-1.8
-0.1
+0.2
motility
Motility_outer_sample_with_outgrowth
N.D.
+0.0
-2.2
-0.1
+0.5
carbon source
L-Rhamnose (C)
N.D.
-0.0
-2.2
+0.2
+0.4
carbon source
L-Histidine (C)
N.D.
+0.1
-1.9
+0.1
+0.3
motility
Motility_inner_sample_with_outgrowth
N.D.
-0.1
-1.5
+0.3
+0.0
carbon source
L-Leucine (C)
N.D.
-0.0
-1.6
+0.2
+0.4
carbon source
2-Deoxy-D-Ribose (C)
N.D.
+0.0
-1.4
+0.2
+0.1
carbon source
Fumaric (C)
N.D.
-0.0
-1.4
+0.2
+0.2
carbon source
L-Histidine (C)
N.D.
-0.0
-1.3
+0.3
+0.1
motility
Motility_outer_sample_with_outgrowth
N.D.
-0.0
-0.9
-0.2
+0.3
carbon source
D-Fructose (C)
N.D.
+0.0
-1.1
+0.1
+0.1
carbon source
L-Aspartic Acid (C)
N.D.
+0.0
-1.2
+0.2
+0.4
carbon source
succinate (C)
N.D.
-0.0
-1.2
+0.6
+0.2
motility
Motility_inner_sample_with_outgrowth
N.D.
+0.0
-1.0
+0.2
+0.4
motility
Motility_inner_sample
N.D.
-0.1
-0.9
-0.0
+0.6
motility
Motility_outer_sample_with_outgrowth
N.D.
-0.0
-0.9
+0.1
+0.4
carbon source
D,L-Lactate (C)
N.D.
-0.0
-0.8
+0.3
+0.3
carbon source
L-Glutamic (C)
N.D.
-0.1
-0.7
+0.3
+0.3
carbon source
casaminos (C)
N.D.
-0.0
+0.7
+0.3
+0.4
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QEN71_RS09470
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