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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS08825 and QEN71_RS08830 are separated by 794 nucleotides
QEN71_RS08830 and QEN71_RS08835 are separated by 23 nucleotides
QEN71_RS08835 and QEN71_RS08840 are separated by 67 nucleotides
QEN71_RS08840 and QEN71_RS08845 are separated by 98 nucleotides
QEN71_RS08825: QEN71_RS08825 - hypothetical protein, at 1,982,638 to 1,982,808
_RS08825
QEN71_RS08830: QEN71_RS08830 - MFS transporter, at 1,983,603 to 1,984,898
_RS08830
QEN71_RS08835: QEN71_RS08835 - glycoside hydrolase family 31 protein, at 1,984,922 to 1,987,363
_RS08835
QEN71_RS08840: QEN71_RS08840 - porin, at 1,987,431 to 1,988,618
_RS08840
QEN71_RS08845: QEN71_RS08845 - VOC family protein, at 1,988,717 to 1,989,109
_RS08845
Group
Condition
QEN71
_RS08825
QEN71
_RS08830
QEN71
_RS08835
QEN71
_RS08840
QEN71
_RS08845
carbon source
D-Glucose (C)
-2.5
+0.3
-0.1
+0.1
-0.3
carbon source
D,L-Malic Acid (C)
-1.0
-0.3
-0.1
-0.0
+0.0
motility
Motility_outer_sample_with_outgrowth
-0.7
-0.4
-0.0
-0.0
-0.1
stress
LB_noSalt with Chloride 200 mM
-1.2
+0.1
-0.0
+0.0
-0.1
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.8
+0.0
-0.1
-0.1
-0.1
stress
LB_noSalt with Chloride 200 mM
-0.9
-0.2
-0.0
+0.0
-0.1
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.7
-0.3
+0.0
+0.0
-0.2
carbon source
succinate (C)
-1.1
-0.0
+0.1
+0.1
-0.0
carbon source
L-Leucine (C)
-0.4
-0.2
-0.0
+0.0
-0.2
carbon source
L-Aspartic Acid (C)
-1.0
+0.0
+0.1
+0.0
-0.0
motility
Motility_inner_sample
-0.9
-0.2
+0.2
+0.1
-0.0
carbon source
L-Rhamnose (C)
-0.4
-0.2
-0.0
-0.0
-0.2
carbon source
L-Histidine (C)
-0.9
-0.0
+0.0
+0.1
+0.1
motility
Motility_outer_sample_with_outgrowth
-0.3
-0.2
+0.0
+0.0
-0.3
stress
LB_noSalt with Chloride 200 mM
-0.8
+0.1
+0.1
+0.0
-0.0
carbon source
D,L-Lactate (C)
-0.7
-0.0
-0.1
+0.0
+0.1
carbon source
D-Glucose (C)
-0.4
+0.2
-0.1
-0.1
-0.3
carbon source
D,L-Malic Acid (C)
-0.7
-0.0
+0.0
-0.0
+0.1
carbon source
D-Xylose (C)
-0.5
-0.4
+0.2
+0.0
+0.2
carbon source
L-Glutamic (C)
-0.6
+0.0
-0.1
+0.1
-0.1
stress
LB_noSalt with Chloride 200 mM
-0.7
-0.3
+0.1
+0.1
+0.3
coculture
Psabiae_ML3b with MT81
-1.1
+0.2
+0.2
+0.0
+0.2
carbon source
L-Aspartic Acid (C)
-0.4
+0.1
-0.3
-0.1
+0.2
supernatant
Filtered_supernatant_MT81_in_LB
-0.4
-0.2
+0.1
+0.0
+0.0
motility
Motility_inner_sample_with_outgrowth
-0.0
+0.2
-0.0
-0.1
-0.4
carbon source
casaminos (C)
-0.4
+0.3
+0.0
+0.0
-0.2
carbon source
D-Sorbitol (C)
-0.1
-0.4
-0.0
+0.0
+0.4
stress
LB_noSalt with Zinc 0.5 mM
-0.6
+0.3
+0.2
-0.1
+0.3
motility
Motility_outer_sample
+0.4
-0.2
-0.1
-0.0
+0.2
motility
Motility_outer_sample
+0.4
+0.0
+0.2
+0.1
+0.2
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QEN71_RS08835
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QEN71_RS08840
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