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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS08795 and QEN71_RS08800 are separated by 72 nucleotides
QEN71_RS08800 and QEN71_RS08805 are separated by 91 nucleotides
QEN71_RS08805 and QEN71_RS08810 are separated by 103 nucleotides
QEN71_RS08810 and QEN71_RS08815 are separated by 22 nucleotides
QEN71_RS08795: QEN71_RS08795 - MarC family protein, at 1,975,809 to 1,976,480
_RS08795
QEN71_RS08800: QEN71_RS08800 - class II glutamine amidotransferase, at 1,976,553 to 1,977,386
_RS08800
QEN71_RS08805: QEN71_RS08805 - EAL domain-containing protein, at 1,977,478 to 1,979,793
_RS08805
QEN71_RS08810: QEN71_RS08810 - endo alpha-1,4 polygalactosaminidase, at 1,979,897 to 1,980,835
_RS08810
QEN71_RS08815: QEN71_RS08815 - LysE family translocator, at 1,980,858 to 1,981,496
_RS08815
Group
Condition
QEN71
_RS08795
QEN71
_RS08800
QEN71
_RS08805
QEN71
_RS08810
QEN71
_RS08815
carbon source
D,L-Malic Acid (C)
-0.2
-0.2
-0.1
+0.0
-0.0
carbon source
2-Deoxy-D-Ribose (C)
+0.0
-0.2
-0.1
+0.0
-0.2
carbon source
D-Sorbitol (C)
-0.3
+0.1
-0.1
+0.1
-0.1
carbon source
D-Fructose (C)
-0.0
-0.2
+0.1
+0.1
-0.2
carbon source
casaminos (C)
-0.0
-0.2
+0.1
+0.0
-0.1
supernatant
Filtered_supernatant_MT81_in_LB
-0.1
-0.1
-0.1
+0.2
+0.0
stress
LB_noSalt with Chloride 200 mM
-0.1
-0.1
+0.0
+0.2
-0.2
carbon source
L-Glutamic (C)
-0.1
-0.3
+0.0
+0.1
+0.1
motility
Motility_inner_sample_with_outgrowth
-0.2
+0.0
+0.1
+0.2
-0.1
stress
LB_noSalt with Chloride 200 mM
-0.2
-0.2
+0.0
+0.3
-0.0
carbon source
D-Fructose (C)
+0.0
-0.2
-0.1
+0.2
-0.0
carbon source
Fumaric (C)
-0.1
-0.2
+0.0
+0.2
+0.0
carbon source
L-Aspartic Acid (C)
-0.1
-0.1
+0.0
+0.2
-0.0
motility
Motility_outer_sample
-0.3
+0.2
+0.1
+0.0
+0.1
stress
LB_noSalt with Chloride 200 mM
-0.2
-0.1
+0.1
+0.2
+0.1
carbon source
D,L-Malic Acid (C)
-0.1
-0.1
+0.0
+0.2
+0.2
carbon source
L-Histidine (C)
-0.1
-0.2
+0.2
+0.1
+0.1
carbon source
2-Deoxy-D-Ribose (C)
+0.2
-0.1
+0.1
+0.0
+0.0
motility
Motility_inner_sample
+0.1
+0.2
+0.1
-0.1
-0.0
carbon source
D,L-Lactate (C)
+0.2
-0.2
+0.0
+0.2
+0.0
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.1
+0.3
-0.1
-0.0
-0.0
stress
LB_noSalt with Zinc 0.5 mM
-0.0
+0.3
+0.1
+0.1
-0.1
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.2
-0.4
+0.4
-0.0
+0.3
motility
Motility_outer_sample
+0.2
+0.2
-0.0
+0.1
+0.1
carbon source
D,L-Lactate (C)
+0.2
-0.0
+0.1
+0.3
+0.1
carbon source
D-Glucose (C)
+0.2
+0.1
+0.1
+0.2
+0.1
carbon source
L-Leucine (C)
+0.1
+0.2
+0.1
+0.2
+0.2
stress
LB_noSalt with Cobalt chloride 0.25 mM
+0.1
+0.2
+0.1
+0.1
+0.1
carbon source
D-Xylose (C)
+0.1
+0.2
+0.1
+0.1
+0.2
motility
Motility_inner_sample
+0.3
+0.3
-0.0
+0.1
+0.2
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QEN71_RS08805
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