Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS08795 and QEN71_RS08800 are separated by 72 nucleotidesQEN71_RS08800 and QEN71_RS08805 are separated by 91 nucleotidesQEN71_RS08805 and QEN71_RS08810 are separated by 103 nucleotidesQEN71_RS08810 and QEN71_RS08815 are separated by 22 nucleotides QEN71_RS08795: QEN71_RS08795 - MarC family protein, at 1,975,809 to 1,976,480 _RS08795 QEN71_RS08800: QEN71_RS08800 - class II glutamine amidotransferase, at 1,976,553 to 1,977,386 _RS08800 QEN71_RS08805: QEN71_RS08805 - EAL domain-containing protein, at 1,977,478 to 1,979,793 _RS08805 QEN71_RS08810: QEN71_RS08810 - endo alpha-1,4 polygalactosaminidase, at 1,979,897 to 1,980,835 _RS08810 QEN71_RS08815: QEN71_RS08815 - LysE family translocator, at 1,980,858 to 1,981,496 _RS08815
Group Condition QEN71_RS08795 QEN71_RS08800 QEN71_RS08805 QEN71_RS08810 QEN71_RS08815
carbon source D,L-Malic Acid (C) -0.2 -0.2 -0.1 +0.0 -0.0
carbon source 2-Deoxy-D-Ribose (C) +0.0 -0.2 -0.1 +0.0 -0.2
carbon source D-Sorbitol (C) -0.3 +0.1 -0.1 +0.1 -0.1
carbon source D-Fructose (C) -0.0 -0.2 +0.1 +0.1 -0.2
carbon source casaminos (C) -0.0 -0.2 +0.1 +0.0 -0.1
supernatant Filtered_supernatant_MT81_in_LB -0.1 -0.1 -0.1 +0.2 +0.0
stress LB_noSalt with Chloride 200 mM -0.1 -0.1 +0.0 +0.2 -0.2
carbon source L-Glutamic (C) -0.1 -0.3 +0.0 +0.1 +0.1
motility Motility_inner_sample_with_outgrowth -0.2 +0.0 +0.1 +0.2 -0.1
stress LB_noSalt with Chloride 200 mM -0.2 -0.2 +0.0 +0.3 -0.0
carbon source D-Fructose (C) +0.0 -0.2 -0.1 +0.2 -0.0
carbon source Fumaric (C) -0.1 -0.2 +0.0 +0.2 +0.0
carbon source L-Aspartic Acid (C) -0.1 -0.1 +0.0 +0.2 -0.0
motility Motility_outer_sample -0.3 +0.2 +0.1 +0.0 +0.1
stress LB_noSalt with Chloride 200 mM -0.2 -0.1 +0.1 +0.2 +0.1
carbon source D,L-Malic Acid (C) -0.1 -0.1 +0.0 +0.2 +0.2
carbon source L-Histidine (C) -0.1 -0.2 +0.2 +0.1 +0.1
carbon source 2-Deoxy-D-Ribose (C) +0.2 -0.1 +0.1 +0.0 +0.0
motility Motility_inner_sample +0.1 +0.2 +0.1 -0.1 -0.0
carbon source D,L-Lactate (C) +0.2 -0.2 +0.0 +0.2 +0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.3 -0.1 -0.0 -0.0
stress LB_noSalt with Zinc 0.5 mM -0.0 +0.3 +0.1 +0.1 -0.1
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 -0.4 +0.4 -0.0 +0.3
motility Motility_outer_sample +0.2 +0.2 -0.0 +0.1 +0.1
carbon source D,L-Lactate (C) +0.2 -0.0 +0.1 +0.3 +0.1
carbon source D-Glucose (C) +0.2 +0.1 +0.1 +0.2 +0.1
carbon source L-Leucine (C) +0.1 +0.2 +0.1 +0.2 +0.2
stress LB_noSalt with Cobalt chloride 0.25 mM +0.1 +0.2 +0.1 +0.1 +0.1
carbon source D-Xylose (C) +0.1 +0.2 +0.1 +0.1 +0.2
motility Motility_inner_sample +0.3 +0.3 -0.0 +0.1 +0.2
remove
QEN71_RS08795
plot
remove
QEN71_RS08800
plot
remove
QEN71_RS08805
remove
QEN71_RS08810
plot
remove
QEN71_RS08815
plot