Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS08095 and QEN71_RS08100 are separated by 680 nucleotidesQEN71_RS08100 and QEN71_RS08105 are separated by 390 nucleotidesQEN71_RS08105 and QEN71_RS08110 are separated by 243 nucleotidesQEN71_RS08110 and QEN71_RS08115 are separated by 107 nucleotides QEN71_RS08095: QEN71_RS08095 - GGDEF domain-containing protein, at 1,791,802 to 1,793,262 _RS08095 QEN71_RS08100: QEN71_RS08100 - polysaccharide pyruvyl transferase family protein, at 1,793,943 to 1,795,145 _RS08100 QEN71_RS08105: QEN71_RS08105 - hypothetical protein, at 1,795,536 to 1,795,748 _RS08105 QEN71_RS08110: QEN71_RS08110 - alpha/beta hydrolase, at 1,795,992 to 1,796,813 _RS08110 QEN71_RS08115: QEN71_RS08115 - DUF2164 domain-containing protein, at 1,796,921 to 1,797,184 _RS08115
Group Condition QEN71_RS08095 QEN71_RS08100 QEN71_RS08105 QEN71_RS08110 QEN71_RS08115
carbon source L-Leucine (C) -0.4 +0.4 -0.7 -0.5 -3.2
motility Motility_outer_sample -0.1 -0.1 +0.2 -0.2 -4.0
stress LB_noSalt with Chloride 200 mM -0.1 +0.0 -1.0 -0.3 -2.2
motility Motility_outer_sample_with_outgrowth -0.1 -0.2 -0.4 -0.2 -2.3
motility Motility_outer_sample_with_outgrowth -0.0 -0.5 +0.1 -0.7 -2.0
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 +0.8 -0.6 +0.5 -3.7
carbon source D-Sorbitol (C) -0.1 -0.7 +0.1 -0.8 -1.4
motility Motility_inner_sample_with_outgrowth +0.2 +0.0 -0.4 -1.3 -1.0
carbon source D,L-Malic Acid (C) -0.1 -0.1 +0.3 -0.5 -2.0
carbon source casaminos (C) -0.1 -0.3 +0.3 +0.0 -2.3
stress LB_noSalt with Zinc 0.5 mM -0.1 +0.1 -0.3 -0.3 -1.7
motility Motility_inner_sample -0.0 -0.1 -0.1 -0.8 -1.2
stress LB_noSalt with Chloride 200 mM -0.1 +0.2 -0.7 -0.1 -1.5
carbon source D,L-Malic Acid (C) -0.1 +0.0 +0.4 +0.5 -3.0
motility Motility_inner_sample_with_outgrowth +0.2 -0.1 +0.1 -0.3 -2.0
carbon source succinate (C) -0.3 -0.1 -0.0 -0.0 -1.5
carbon source succinate (C) -0.2 +0.2 -0.4 -0.1 -1.3
stress LB_noSalt with Chloride 200 mM +0.0 +0.2 -0.3 -0.8 -0.9
carbon source 2-Deoxy-D-Ribose (C) -0.1 -0.5 -0.1 +0.1 -1.2
motility Motility_inner_sample -0.0 -0.1 +0.2 +0.1 -1.7
carbon source L-Rhamnose (C) -0.4 -0.0 -0.6 -0.5 +0.2
carbon source D-Fructose (C) -0.1 +0.3 -0.0 -0.2 -1.0
supernatant Filtered_supernatant_MT71_in_LB -0.0 +0.2 -0.3 +0.3 -1.2
coculture Psabiae_ML3b with MT80 -0.1 +0.4 +0.0 -0.7 -0.4
carbon source D,L-Lactate (C) -0.2 +0.2 +0.2 +0.0 -1.0
carbon source D-Glucose (C) -0.2 +0.4 +0.4 -0.2 -0.8
carbon source L-Histidine (C) +0.2 -0.3 +0.1 +0.7 -1.1
carbon source D,L-Lactate (C) -0.3 +0.3 +0.1 +0.6 -0.8
motility Motility_outer_sample_with_outgrowth +0.0 -0.2 -0.5 +0.9 +0.4
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 -0.2 +0.2 +1.3 +0.2
remove
QEN71_RS08095
plot		 remove
QEN71_RS08100
plot		 remove
QEN71_RS08105		 remove
QEN71_RS08110
plot		 remove
QEN71_RS08115
plot