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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS07955 and QEN71_RS07960 are separated by 158 nucleotides
QEN71_RS07960 and QEN71_RS07965 are separated by 38 nucleotides
QEN71_RS07965 and QEN71_RS07970 are separated by 206 nucleotides
QEN71_RS07970 and QEN71_RS07975 overlap by 31 nucleotides
QEN71_RS07955: QEN71_RS07955 - glutathione S-transferase, at 1,761,768 to 1,762,394
_RS07955
QEN71_RS07960: QEN71_RS07960 - ATP-binding domain-containing protein, at 1,762,553 to 1,764,226
_RS07960
QEN71_RS07965: QEN71_RS07965 - phosphoribosyltransferase, at 1,764,265 to 1,765,212
_RS07965
QEN71_RS07970: QEN71_RS07970 - molybdopterin-dependent oxidoreductase, at 1,765,419 to 1,765,943
_RS07970
QEN71_RS07975: QEN71_RS07975 - ATP-binding protein, at 1,765,913 to 1,767,766
_RS07975
Group
Condition
QEN71
_RS07955
QEN71
_RS07960
QEN71
_RS07965
QEN71
_RS07970
QEN71
_RS07975
carbon source
D-Xylose (C)
-0.2
-0.0
-0.8
-0.2
-0.3
carbon source
L-Histidine (C)
-0.2
-0.0
-0.5
-0.4
-0.2
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.4
-0.0
-0.3
-0.2
-0.3
carbon source
D,L-Malic Acid (C)
-0.2
-0.1
-0.6
-0.2
-0.3
carbon source
casaminos (C)
-0.2
-0.1
-0.4
-0.2
-0.3
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.3
-0.0
-0.4
-0.3
-0.2
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.3
-0.1
-0.1
-0.2
-0.3
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.2
+0.0
-0.7
+0.0
-0.1
carbon source
L-Histidine (C)
+0.0
-0.1
-0.4
-0.4
-0.2
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.1
-0.1
-0.2
-0.2
-0.3
carbon source
L-Leucine (C)
+0.0
-0.0
-0.4
-0.3
-0.2
carbon source
L-Glutamic (C)
-0.3
-0.0
-0.3
-0.2
-0.1
supernatant
Filtered_supernatant_MT81_in_LB
-0.2
-0.1
-0.2
-0.2
-0.1
carbon source
succinate (C)
-0.2
-0.0
-0.2
-0.2
-0.2
carbon source
D,L-Lactate (C)
-0.1
-0.0
-0.2
-0.3
-0.1
carbon source
D,L-Malic Acid (C)
-0.0
+0.1
-0.4
-0.0
-0.4
coculture
Psabiae_ML3b with MT81
-0.2
-0.0
-0.2
-0.1
-0.1
carbon source
D-Sorbitol (C)
-0.1
-0.0
-0.4
+0.0
-0.1
carbon source
Fumaric (C)
-0.0
+0.1
-0.2
-0.3
-0.2
stress
LB_noSalt with Chloride 200 mM
-0.4
-0.1
+0.4
-0.1
+0.2
motility
Motility_inner_sample_with_outgrowth
-0.2
+0.1
+0.1
-0.3
+0.1
stress
LB_noSalt with Chloride 200 mM
-0.3
-0.0
+0.4
-0.0
+0.1
stress
LB_noSalt with Zinc 0.5 mM
-0.4
-0.1
+1.2
+0.2
+0.6
stress
LB_noSalt with Zinc 0.5 mM
-0.0
-0.1
+1.1
+0.2
+0.6
motility
Motility_outer_sample_with_outgrowth
-0.5
+0.1
+1.4
+0.3
+0.7
motility
Motility_outer_sample_with_outgrowth
-0.2
+0.1
+1.3
+0.4
+1.0
motility
Motility_outer_sample
-0.3
+0.1
+1.5
+0.4
+0.9
motility
Motility_outer_sample
+0.0
+0.1
+1.4
+0.3
+0.9
motility
Motility_outer_sample_with_outgrowth
-0.4
+0.1
+1.5
+0.5
+1.0
motility
Motility_outer_sample_with_outgrowth
-0.1
+0.2
+1.4
+0.5
+0.9
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