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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS07940 and QEN71_RS07945 are separated by 41 nucleotides
QEN71_RS07945 and QEN71_RS07950 are separated by 54 nucleotides
QEN71_RS07950 and QEN71_RS07955 are separated by 4 nucleotides
QEN71_RS07955 and QEN71_RS07960 are separated by 158 nucleotides
QEN71_RS07940: QEN71_RS07940 - response regulator, at 1,759,995 to 1,760,459
_RS07940
QEN71_RS07945: QEN71_RS07945 - Fur family transcriptional regulator, at 1,760,501 to 1,761,082
_RS07945
QEN71_RS07950: QEN71_RS07950 - glutathione binding-like protein, at 1,761,137 to 1,761,763
_RS07950
QEN71_RS07955: QEN71_RS07955 - glutathione S-transferase, at 1,761,768 to 1,762,394
_RS07955
QEN71_RS07960: QEN71_RS07960 - ATP-binding domain-containing protein, at 1,762,553 to 1,764,226
_RS07960
Group
Condition
QEN71
_RS07940
QEN71
_RS07945
QEN71
_RS07950
QEN71
_RS07955
QEN71
_RS07960
motility
Motility_outer_sample_with_outgrowth
+0.1
-1.8
-0.1
-0.5
+0.1
motility
Motility_outer_sample
-0.8
-1.4
+0.1
-0.3
+0.1
motility
Motility_outer_sample_with_outgrowth
-0.4
-1.3
+0.0
-0.4
+0.1
motility
Motility_outer_sample_with_outgrowth
-0.2
-1.5
-0.0
-0.2
+0.1
motility
Motility_outer_sample_with_outgrowth
-0.6
-1.2
+0.1
-0.1
+0.2
motility
Motility_outer_sample
-0.1
-1.3
-0.0
+0.0
+0.1
stress
LB_noSalt with Zinc 0.5 mM
-0.3
-0.5
-0.1
-0.4
-0.1
motility
Motility_inner_sample_with_outgrowth
-0.3
-0.9
-0.2
+0.1
+0.1
motility
Motility_inner_sample
-0.1
-1.0
-0.1
-0.1
+0.1
stress
LB_noSalt with Chloride 200 mM
-0.6
-0.3
-0.1
-0.2
+0.0
motility
Motility_inner_sample
+0.1
-0.8
-0.2
-0.2
+0.2
stress
LB_noSalt with Zinc 0.5 mM
-0.5
-0.1
-0.1
-0.0
-0.1
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.3
-0.1
-0.3
-0.2
+0.0
motility
Motility_inner_sample_with_outgrowth
+0.1
-0.6
-0.2
-0.2
+0.1
motility
Motility_inner_sample
-0.1
-0.5
-0.1
+0.1
-0.1
stress
LB_noSalt with Chloride 200 mM
-0.6
+0.2
-0.0
-0.3
-0.0
stress
LB_noSalt with Chloride 200 mM
-0.8
+0.1
+0.0
+0.0
+0.0
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.6
+0.3
-0.1
-0.3
-0.0
supernatant
Filtered_supernatant_MT80_in_LB
-0.3
-0.2
+0.0
-0.2
+0.1
stress
LB_noSalt with Chloride 200 mM
-0.4
+0.5
-0.1
-0.4
-0.1
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.1
-0.5
+0.1
-0.1
-0.1
carbon source
D,L-Lactate (C)
-0.4
+0.4
-0.0
-0.1
+0.1
carbon source
casaminos (C)
+0.4
+0.2
-0.3
-0.2
-0.1
carbon source
L-Histidine (C)
-0.3
+0.6
-0.1
+0.0
-0.1
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.9
-0.4
+0.0
-0.4
-0.0
carbon source
D-Sorbitol (C)
+0.1
+0.7
-0.4
-0.1
-0.0
carbon source
succinate (C)
+0.4
+0.3
-0.2
-0.2
-0.0
carbon source
L-Histidine (C)
-0.1
+0.7
-0.1
-0.2
-0.0
carbon source
D-Xylose (C)
+0.6
+0.3
-0.2
-0.2
-0.0
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.4
+0.4
+0.2
-0.3
-0.1
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