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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS07925 and QEN71_RS07930 are separated by 435 nucleotides
QEN71_RS07930 and QEN71_RS07935 are separated by 89 nucleotides
QEN71_RS07935 and QEN71_RS07940 are separated by 394 nucleotides
QEN71_RS07940 and QEN71_RS07945 are separated by 41 nucleotides
QEN71_RS07925: QEN71_RS07925 - zinc ribbon domain-containing protein, at 1,755,702 to 1,756,838
_RS07925
QEN71_RS07930: QEN71_RS07930 - MDR family MFS transporter, at 1,757,274 to 1,758,782
_RS07930
QEN71_RS07935: QEN71_RS07935 - TetR/AcrR family transcriptional regulator, at 1,758,872 to 1,759,600
_RS07935
QEN71_RS07940: QEN71_RS07940 - response regulator, at 1,759,995 to 1,760,459
_RS07940
QEN71_RS07945: QEN71_RS07945 - Fur family transcriptional regulator, at 1,760,501 to 1,761,082
_RS07945
Group
Condition
QEN71
_RS07925
QEN71
_RS07930
QEN71
_RS07935
QEN71
_RS07940
QEN71
_RS07945
motility
Motility_inner_sample_with_outgrowth
-0.1
-0.0
-0.4
-0.3
-0.9
motility
Motility_outer_sample
-0.2
+0.1
+0.7
-0.8
-1.4
motility
Motility_outer_sample_with_outgrowth
+0.0
+0.0
+0.2
+0.1
-1.8
motility
Motility_inner_sample
-0.0
+0.1
-0.4
-0.1
-1.0
motility
Motility_outer_sample_with_outgrowth
+0.0
+0.1
+0.3
-0.6
-1.2
motility
Motility_inner_sample_with_outgrowth
-0.3
+0.1
-0.6
+0.1
-0.6
motility
Motility_outer_sample_with_outgrowth
-0.3
+0.2
+0.7
-0.4
-1.3
motility
Motility_outer_sample
-0.2
+0.0
+0.6
-0.1
-1.3
motility
Motility_outer_sample_with_outgrowth
-0.1
-0.1
+0.8
-0.2
-1.5
motility
Motility_inner_sample
+0.0
+0.0
-0.4
-0.1
-0.5
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.1
+0.0
-0.7
+0.1
-0.5
stress
LB_noSalt with Zinc 0.5 mM
+0.2
+0.2
-0.5
-0.3
-0.5
motility
Motility_inner_sample
+0.1
+0.1
-0.3
+0.1
-0.8
stress
LB_noSalt with Zinc 0.5 mM
+0.0
+0.2
-0.2
-0.5
-0.1
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.1
-0.0
-1.1
+0.9
-0.4
stress
LB_noSalt with Chloride 200 mM
+0.0
+0.0
+0.4
-0.6
-0.3
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.3
+0.1
+0.3
-0.3
-0.1
stress
LB_noSalt with Chloride 200 mM
-0.1
+0.0
+0.3
-0.6
+0.2
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.4
-0.0
-0.1
-0.6
+0.3
stress
LB_noSalt with Chloride 200 mM
+0.1
+0.1
+0.5
-0.8
+0.1
carbon source
D,L-Lactate (C)
-0.0
+0.0
+0.2
-0.4
+0.4
carbon source
casaminos (C)
-0.3
-0.0
-0.2
+0.4
+0.2
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.1
+0.2
-0.6
+0.4
+0.4
carbon source
L-Histidine (C)
-0.0
+0.1
-0.0
-0.3
+0.6
stress
LB_noSalt with Chloride 200 mM
-0.2
-0.1
+0.5
-0.4
+0.5
carbon source
L-Histidine (C)
-0.2
+0.1
-0.0
-0.1
+0.7
carbon source
L-Rhamnose (C)
-0.0
+0.0
+0.6
-0.3
+0.3
carbon source
D-Xylose (C)
-0.0
-0.0
-0.0
+0.6
+0.3
carbon source
D-Sorbitol (C)
+0.1
-0.2
+0.2
+0.1
+0.7
carbon source
D-Fructose (C)
+0.1
+0.2
+0.4
-0.0
+0.4
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QEN71_RS07935
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