Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS07740 and QEN71_RS07745 are separated by 61 nucleotidesQEN71_RS07745 and QEN71_RS07750 are separated by 33 nucleotidesQEN71_RS07750 and QEN71_RS07755 are separated by 6 nucleotidesQEN71_RS07755 and QEN71_RS07760 are separated by 122 nucleotides QEN71_RS07740: QEN71_RS07740 - ATP-binding cassette domain-containing protein, at 1,715,810 to 1,716,601 _RS07740 QEN71_RS07745: QEN71_RS07745 - histidine ammonia-lyase, at 1,716,663 to 1,718,270 _RS07745 QEN71_RS07750: QEN71_RS07750 - histidine utilization repressor, at 1,718,304 to 1,719,059 _RS07750 QEN71_RS07755: QEN71_RS07755 - histidine utilization repressor, at 1,719,066 to 1,719,815 _RS07755 QEN71_RS07760: QEN71_RS07760 - amino acid ABC transporter ATP-binding protein, at 1,719,938 to 1,720,804 _RS07760
Group Condition QEN71_RS07740 QEN71_RS07745 QEN71_RS07750 QEN71_RS07755 QEN71_RS07760
carbon source Fumaric (C) N.D. -0.2 -0.1 -0.5 -1.6
stress LB_noSalt with Chloride 200 mM N.D. -0.0 +0.1 -0.3 -2.0
carbon source L-Rhamnose (C) N.D. +0.2 -0.1 -0.7 -1.5
stress LB_noSalt with Chloride 200 mM N.D. +0.1 -0.1 -0.5 -1.4
carbon source succinate (C) N.D. +0.0 -0.1 -0.2 -1.4
carbon source succinate (C) N.D. +0.0 +0.2 -0.3 -1.3
stress LB_noSalt with Zinc 0.5 mM N.D. -0.1 +0.2 -0.5 -0.9
carbon source L-Rhamnose (C) N.D. -0.2 +0.1 -0.4 -0.8
carbon source D,L-Lactate (C) N.D. -0.1 +0.2 -0.0 -1.2
motility Motility_outer_sample N.D. +0.3 +0.1 -0.1 -1.3
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.0 +0.2 +0.2 -1.4
motility Motility_outer_sample_with_outgrowth N.D. -0.2 -0.0 -0.3 -0.5
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.0 +0.2 -0.1 -1.0
carbon source D-Sorbitol (C) N.D. +0.0 +0.1 -0.3 -0.6
stress LB_noSalt with Cobalt chloride 0.25 mM N.D. +0.2 +0.2 -0.5 -0.6
stress LB_noSalt with Chloride 200 mM N.D. -0.1 +0.3 +0.3 -1.3
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.0 +0.1 +0.2 -1.0
carbon source D-Fructose (C) N.D. -0.6 +0.2 +0.3 -0.5
carbon source Fumaric (C) N.D. -0.1 +0.3 -0.4 -0.5
carbon source L-Aspartic Acid (C) N.D. -0.0 +0.5 -0.2 -0.9
motility Motility_inner_sample N.D. +0.0 +0.2 -0.0 -0.8
carbon source D,L-Lactate (C) N.D. +0.2 +0.2 +0.0 -0.6
motility Motility_inner_sample N.D. -0.2 +0.4 -0.2 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.2 +0.2 -0.3 +0.3
motility Motility_outer_sample N.D. -0.3 +0.4 -0.4 +0.3
carbon source D-Fructose (C) N.D. -0.1 +0.6 +0.2 -0.3
coculture Psabiae_ML3b with MT81 N.D. -0.0 +0.3 -0.3 +0.5
carbon source D,L-Malic Acid (C) N.D. +0.1 +0.4 -0.2 +0.3
carbon source L-Histidine (C) N.D. +0.9 +0.8 -0.1 -0.3
carbon source L-Histidine (C) N.D. +0.9 +0.8 -0.1 +0.2
remove
QEN71_RS07740
plot		 remove
QEN71_RS07745
plot		 remove
QEN71_RS07750		 remove
QEN71_RS07755
plot		 remove
QEN71_RS07760
plot