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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS07410 and QEN71_RS07415 are separated by 90 nucleotides
QEN71_RS07415 and QEN71_RS07420 are separated by 257 nucleotides
QEN71_RS07420 and QEN71_RS07425 are separated by 237 nucleotides
QEN71_RS07425 and QEN71_RS07430 are separated by 310 nucleotides
QEN71_RS07410: QEN71_RS07410 - hypothetical protein, at 1,647,985 to 1,648,461
_RS07410
QEN71_RS07415: QEN71_RS07415 - MFS transporter, at 1,648,552 to 1,649,871
_RS07415
QEN71_RS07420: QEN71_RS07420 - mechanosensitive ion channel family protein, at 1,650,129 to 1,650,986
_RS07420
QEN71_RS07425: QEN71_RS07425 - hypothetical protein, at 1,651,224 to 1,651,436
_RS07425
QEN71_RS07430: QEN71_RS07430 - hypothetical protein, at 1,651,747 to 1,652,010
_RS07430
Group
Condition
QEN71
_RS07410
QEN71
_RS07415
QEN71
_RS07420
QEN71
_RS07425
QEN71
_RS07430
stress
LB_noSalt with Cobalt chloride 0.25 mM
-0.2
-0.0
-0.1
-0.3
-0.6
supernatant
Filtered_supernatant_MT183_in_LB
-0.0
-0.1
+0.0
-0.5
-0.4
motility
Motility_outer_sample
-0.1
-0.3
+0.0
-0.4
-0.2
carbon source
D-Fructose (C)
-0.2
+0.0
-0.1
-0.3
-0.1
motility
Motility_outer_sample_with_outgrowth
-0.1
-0.1
-0.2
-0.2
-0.1
carbon source
L-Histidine (C)
-0.2
+0.1
-0.0
-0.3
-0.2
stress
LB_noSalt with Chloride 200 mM
-0.0
-0.1
-0.1
+0.1
-0.5
supernatant
Filtered_supernatant_MT71_in_LB
-0.1
+0.0
+0.1
+0.3
-0.8
motility
Motility_inner_sample_with_outgrowth
-0.2
-0.2
+0.1
+0.2
-0.4
carbon source
succinate (C)
+0.2
-0.0
-0.2
+0.1
-0.5
coculture
Psabiae_ML3b with MT81
+0.1
-0.0
-0.2
-0.4
-0.1
carbon source
L-Aspartic Acid (C)
-0.1
-0.1
-0.2
+0.4
-0.3
carbon source
L-Rhamnose (C)
-0.1
-0.0
-0.2
+0.3
-0.2
motility
Motility_outer_sample_with_outgrowth
+0.1
-0.3
-0.2
+0.4
-0.1
carbon source
D-Glucose (C)
-0.2
+0.2
-0.1
+0.1
-0.2
carbon source
D-Sorbitol (C)
-0.3
+0.1
-0.1
+0.2
-0.1
motility
Motility_outer_sample
-0.2
+0.1
+0.0
+0.2
-0.2
carbon source
L-Glutamic (C)
-0.1
+0.1
-0.0
+0.3
-0.4
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.1
-0.0
-0.2
+0.2
-0.2
carbon source
D,L-Lactate (C)
+0.1
+0.1
-0.1
+0.1
-0.3
carbon source
succinate (C)
+0.2
+0.2
+0.1
-0.0
-0.5
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.1
+0.1
-0.1
+0.4
-0.2
carbon source
L-Leucine (C)
-0.0
-0.1
-0.2
+0.0
+0.3
supernatant
Filtered_supernatant_MT81_in_LB
-0.2
+0.2
+0.2
+0.3
-0.4
stress
LB_noSalt with Zinc 0.5 mM
+0.1
+0.1
-0.2
+0.3
-0.1
motility
Motility_outer_sample_with_outgrowth
-0.0
-0.0
+0.1
+0.5
-0.3
stress
LB_noSalt with Chloride 200 mM
+0.1
+0.1
-0.2
+0.3
+0.1
motility
Motility_inner_sample
+0.2
+0.0
-0.1
+0.4
-0.0
carbon source
D-Glucose (C)
+0.1
-0.0
-0.1
+0.4
+0.2
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.4
+0.2
+0.1
-0.1
+0.2
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QEN71_RS07420
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