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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS07315 and QEN71_RS07320 are separated by 19 nucleotides
QEN71_RS07320 and QEN71_RS07325 are separated by 89 nucleotides
QEN71_RS07325 and QEN71_RS07330 are separated by 183 nucleotides
QEN71_RS07330 and QEN71_RS07335 are separated by 569 nucleotides
QEN71_RS07315: QEN71_RS07315 - DNA-binding protein, at 1,626,368 to 1,626,613
_RS07315
QEN71_RS07320: QEN71_RS07320 - type II toxin-antitoxin system VapC family toxin, at 1,626,633 to 1,627,028
_RS07320
QEN71_RS07325: QEN71_RS07325 - hypothetical protein, at 1,627,118 to 1,627,573
_RS07325
QEN71_RS07330: QEN71_RS07330 - magnesium/cobalt transporter CorA, at 1,627,757 to 1,628,734
_RS07330
QEN71_RS07335: QEN71_RS07335 - sugar ABC transporter substrate-binding protein, at 1,629,304 to 1,630,260
_RS07335
Group
Condition
QEN71
_RS07315
QEN71
_RS07320
QEN71
_RS07325
QEN71
_RS07330
QEN71
_RS07335
carbon source
L-Rhamnose (C)
-0.6
-0.1
+0.1
-0.1
-0.5
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.3
+0.1
+0.1
-0.7
-0.1
stress
LB_noSalt with Cobalt chloride 0.25 mM
-0.2
-0.2
-0.1
-0.4
+0.0
motility
Motility_outer_sample_with_outgrowth
-0.6
-0.0
-0.0
-0.0
-0.1
carbon source
D-Xylose (C)
-0.2
+0.0
-0.1
-0.5
+0.1
stress
LB_noSalt with Chloride 200 mM
-0.2
-0.1
+0.1
-0.4
-0.1
carbon source
D-Sorbitol (C)
-0.4
-0.0
-0.2
-0.3
+0.3
motility
Motility_outer_sample
-0.1
+0.0
+0.0
+0.1
-0.6
motility
Motility_outer_sample
-0.3
-0.3
+0.2
-0.3
+0.0
carbon source
Fumaric (C)
-0.2
-0.2
-0.2
+0.2
-0.1
stress
LB_noSalt with Zinc 0.5 mM
-0.4
+0.1
+0.2
-0.5
+0.1
stress
LB_noSalt with Zinc 0.5 mM
-0.3
+0.1
+0.1
-0.5
+0.0
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.5
+0.1
-0.1
-0.2
+0.2
motility
Motility_inner_sample_with_outgrowth
-0.4
-0.3
-0.0
+0.1
+0.0
carbon source
D-Glucose (C)
-0.4
-0.1
-0.1
-0.2
+0.3
carbon source
succinate (C)
+0.1
-0.1
-0.2
-0.4
+0.1
motility
Motility_outer_sample_with_outgrowth
-0.1
-0.1
+0.1
+0.1
-0.4
carbon source
2-Deoxy-D-Ribose (C)
-0.4
-0.1
-0.0
-0.1
+0.3
motility
Motility_outer_sample_with_outgrowth
-0.3
-0.0
+0.1
+0.3
-0.2
carbon source
L-Histidine (C)
-0.4
+0.1
+0.1
-0.2
+0.2
carbon source
2-Deoxy-D-Ribose (C)
-0.4
+0.0
-0.1
+0.0
+0.3
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.4
+0.2
+0.1
+0.1
-0.1
stress
LB_noSalt with Chloride 200 mM
-0.0
-0.2
+0.2
-0.3
+0.3
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.3
+0.3
-0.0
-0.1
+0.2
carbon source
D-Fructose (C)
-0.2
-0.0
+0.3
-0.2
+0.1
supernatant
Filtered_supernatant_MT80_in_LB
-0.0
+0.2
-0.2
-0.1
+0.3
supernatant
Filtered_supernatant_MT71_in_LB
-0.3
+0.1
+0.1
+0.1
+0.2
motility
Motility_inner_sample
-0.2
-0.2
-0.0
+0.4
+0.2
supernatant
Filtered_supernatant_MT81_in_LB
+0.4
-0.2
+0.2
+0.1
+0.1
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.4
-0.1
+0.1
-0.2
+1.5
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