Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS07115 and QEN71_RS07120 are separated by 510 nucleotidesQEN71_RS07120 and QEN71_RS07125 are separated by 100 nucleotidesQEN71_RS07125 and QEN71_RS07130 overlap by 4 nucleotidesQEN71_RS07130 and QEN71_RS07135 overlap by 1 nucleotides QEN71_RS07115: QEN71_RS07115 - Nramp family divalent metal transporter, at 1,580,668 to 1,581,969 _RS07115 QEN71_RS07120: QEN71_RS07120 - polyamine ABC transporter substrate-binding protein, at 1,582,480 to 1,583,580 _RS07120 QEN71_RS07125: QEN71_RS07125 - polyamine ABC transporter ATP-binding protein, at 1,583,681 to 1,584,844 _RS07125 QEN71_RS07130: QEN71_RS07130 - ABC transporter permease subunit, at 1,584,841 to 1,585,770 _RS07130 QEN71_RS07135: QEN71_RS07135 - ABC transporter permease subunit, at 1,585,770 to 1,586,588 _RS07135
Group Condition QEN71_RS07115 QEN71_RS07120 QEN71_RS07125 QEN71_RS07130 QEN71_RS07135
motility Motility_outer_sample_with_outgrowth -0.9 -0.3 -0.1 -0.2 -0.2
carbon source 2-Deoxy-D-Ribose (C) -0.4 -0.2 -0.2 -0.1 -0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 -0.1 -0.4 -0.3 -0.2
motility Motility_outer_sample -0.5 -0.1 -0.1 -0.2 +0.0
carbon source D,L-Lactate (C) -0.7 -0.1 +0.0 +0.0 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 -0.3 -0.3 -0.1 -0.1
motility Motility_outer_sample -0.2 -0.3 -0.1 -0.1 +0.0
carbon source D-Glucose (C) -0.0 -0.1 -0.2 -0.2 -0.2
motility Motility_outer_sample_with_outgrowth -0.2 -0.1 -0.1 -0.2 -0.0
carbon source 2-Deoxy-D-Ribose (C) -0.1 -0.1 -0.2 -0.2 -0.1
carbon source D,L-Lactate (C) -0.3 -0.1 -0.2 +0.0 -0.2
carbon source L-Leucine (C) -0.8 +0.0 -0.0 +0.2 -0.1
motility Motility_outer_sample_with_outgrowth -0.3 -0.1 -0.2 -0.0 -0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 -0.0 -0.3 -0.1 -0.2
motility Motility_inner_sample_with_outgrowth -0.5 -0.1 -0.1 +0.0 +0.1
carbon source D-Fructose (C) -0.3 -0.0 -0.0 -0.1 -0.2
carbon source D-Xylose (C) -0.4 -0.1 -0.1 +0.1 -0.0
carbon source L-Glutamic (C) -0.5 -0.0 -0.0 -0.1 +0.2
motility Motility_inner_sample -0.6 +0.0 +0.1 -0.1 +0.1
carbon source Fumaric (C) -0.4 -0.1 +0.1 -0.0 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 -0.1 -0.1 +0.1 -0.3
carbon source D-Sorbitol (C) +0.1 -0.2 -0.3 +0.0 -0.2
coculture Psabiae_ML3b with MT81 -0.5 +0.0 +0.0 +0.2 +0.1
stress LB_noSalt with Zinc 0.5 mM -0.3 +0.1 +0.1 -0.0 +0.1
carbon source D-Glucose (C) +0.4 -0.1 -0.1 -0.1 -0.2
motility Motility_inner_sample_with_outgrowth -0.4 -0.1 +0.1 +0.2 +0.2
carbon source L-Histidine (C) -0.2 -0.0 +0.2 +0.1 -0.2
supernatant Filtered_supernatant_MT81_in_LB -0.3 +0.0 +0.1 +0.1 +0.2
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 -0.0 -0.2 +0.1 +0.4
carbon source L-Histidine (C) -0.2 +0.1 +0.0 +0.1 +0.3
remove
QEN71_RS07115
plot		 remove
QEN71_RS07120
plot		 remove
QEN71_RS07125		 remove
QEN71_RS07130
plot		 remove
QEN71_RS07135
plot