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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS06415 and QEN71_RS06420 are separated by 398 nucleotides
QEN71_RS06420 and QEN71_RS06425 are separated by 189 nucleotides
QEN71_RS06425 and QEN71_RS06430 are separated by 245 nucleotides
QEN71_RS06430 and QEN71_RS06435 are separated by 93 nucleotides
QEN71_RS06415: QEN71_RS06415 - type I methionyl aminopeptidase, at 1,426,061 to 1,426,873
_RS06415
QEN71_RS06420: QEN71_RS06420 - 30S ribosomal protein S2, at 1,427,272 to 1,428,024
_RS06420
QEN71_RS06425: QEN71_RS06425 - translation elongation factor Ts, at 1,428,214 to 1,429,095
_RS06425
QEN71_RS06430: QEN71_RS06430 - UMP kinase, at 1,429,341 to 1,430,054
_RS06430
QEN71_RS06435: QEN71_RS06435 - ribosome recycling factor, at 1,430,148 to 1,430,708
_RS06435
Group
Condition
QEN71
_RS06415
QEN71
_RS06420
QEN71
_RS06425
QEN71
_RS06430
QEN71
_RS06435
motility
Motility_outer_sample_with_outgrowth
-2.6
N.D.
N.D.
N.D.
N.D.
motility
Motility_outer_sample_with_outgrowth
-2.6
N.D.
N.D.
N.D.
N.D.
motility
Motility_outer_sample
-2.1
N.D.
N.D.
N.D.
N.D.
motility
Motility_outer_sample_with_outgrowth
-2.1
N.D.
N.D.
N.D.
N.D.
motility
Motility_outer_sample_with_outgrowth
-2.1
N.D.
N.D.
N.D.
N.D.
motility
Motility_outer_sample
-1.9
N.D.
N.D.
N.D.
N.D.
motility
Motility_inner_sample_with_outgrowth
-1.4
N.D.
N.D.
N.D.
N.D.
stress
LB_noSalt with Zinc 0.5 mM
-1.2
N.D.
N.D.
N.D.
N.D.
motility
Motility_inner_sample
-1.2
N.D.
N.D.
N.D.
N.D.
motility
Motility_inner_sample
-1.1
N.D.
N.D.
N.D.
N.D.
motility
Motility_inner_sample
-1.1
N.D.
N.D.
N.D.
N.D.
motility
Motility_inner_sample
-1.1
N.D.
N.D.
N.D.
N.D.
motility
Motility_inner_sample_with_outgrowth
-1.0
N.D.
N.D.
N.D.
N.D.
stress
LB_noSalt with Zinc 0.5 mM
-0.8
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.6
N.D.
N.D.
N.D.
N.D.
stress
LB_noSalt with Cobalt chloride 0.25 mM
-0.4
N.D.
N.D.
N.D.
N.D.
stress
LB_noSalt with Chloride 200 mM
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
succinate (C)
+0.4
N.D.
N.D.
N.D.
N.D.
carbon source
D,L-Malic Acid (C)
+0.4
N.D.
N.D.
N.D.
N.D.
carbon source
D-Fructose (C)
+0.4
N.D.
N.D.
N.D.
N.D.
carbon source
L-Leucine (C)
+0.5
N.D.
N.D.
N.D.
N.D.
carbon source
D,L-Malic Acid (C)
+0.5
N.D.
N.D.
N.D.
N.D.
carbon source
L-Leucine (C)
+0.5
N.D.
N.D.
N.D.
N.D.
carbon source
L-Rhamnose (C)
+0.6
N.D.
N.D.
N.D.
N.D.
carbon source
2-Deoxy-D-Ribose (C)
+0.6
N.D.
N.D.
N.D.
N.D.
carbon source
2-Deoxy-D-Ribose (C)
+0.7
N.D.
N.D.
N.D.
N.D.
carbon source
L-Rhamnose (C)
+0.7
N.D.
N.D.
N.D.
N.D.
carbon source
D-Xylose (C)
+0.9
N.D.
N.D.
N.D.
N.D.
carbon source
L-Histidine (C)
+0.9
N.D.
N.D.
N.D.
N.D.
carbon source
L-Histidine (C)
+1.0
N.D.
N.D.
N.D.
N.D.
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