Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS06390 and QEN71_RS06395 are separated by 183 nucleotidesQEN71_RS06395 and QEN71_RS06400 overlap by 4 nucleotidesQEN71_RS06400 and QEN71_RS06405 are separated by 64 nucleotidesQEN71_RS06405 and QEN71_RS06410 are separated by 6 nucleotides QEN71_RS06390: QEN71_RS06390 - hypothetical protein, at 1,417,522 to 1,418,421 _RS06390 QEN71_RS06395: QEN71_RS06395 - NAD-dependent DNA ligase LigA, at 1,418,605 to 1,420,656 _RS06395 QEN71_RS06400: QEN71_RS06400 - peptide deformylase, at 1,420,653 to 1,421,186 _RS06400 QEN71_RS06405: QEN71_RS06405 - pseudouridine synthase, at 1,421,251 to 1,423,449 _RS06405 QEN71_RS06410: QEN71_RS06410 - [protein-PII] uridylyltransferase, at 1,423,456 to 1,426,035 _RS06410
Group Condition QEN71_RS06390 QEN71_RS06395 QEN71_RS06400 QEN71_RS06405 QEN71_RS06410
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 N.D. -0.5 +0.1 -1.6
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 N.D. -0.2 -0.0 -1.1
motility Motility_outer_sample_with_outgrowth +0.0 N.D. -0.5 +0.4 -0.9
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 N.D. +0.2 +0.1 -1.1
motility Motility_inner_sample +0.2 N.D. -0.1 +0.1 -0.7
motility Motility_outer_sample_with_outgrowth +0.1 N.D. -0.1 +0.2 -0.7
motility Motility_inner_sample -0.1 N.D. +0.4 +0.1 -0.8
motility Motility_outer_sample +0.2 N.D. -0.4 +0.4 -0.7
motility Motility_inner_sample_with_outgrowth +0.0 N.D. +0.1 +0.2 -0.8
motility Motility_outer_sample_with_outgrowth +0.2 N.D. -0.1 +0.4 -0.8
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 N.D. +0.3 +0.1 -0.8
motility Motility_outer_sample_with_outgrowth +0.1 N.D. -0.0 +0.4 -0.8
motility Motility_outer_sample +0.2 N.D. -0.2 +0.3 -0.5
motility Motility_inner_sample +0.0 N.D. +0.5 +0.1 -0.7
carbon source D,L-Malic Acid (C) -0.2 N.D. +0.1 -0.2 +0.6
carbon source L-Leucine (C) +0.1 N.D. -0.3 -0.1 +1.0
carbon source Fumaric (C) +0.3 N.D. +0.4 -0.3 +0.4
carbon source L-Histidine (C) +0.2 N.D. -0.7 -0.1 +1.4
carbon source L-Leucine (C) +0.0 N.D. -0.1 +0.1 +1.0
carbon source D-Fructose (C) +0.1 N.D. -0.5 -0.1 +1.4
carbon source D,L-Malic Acid (C) -0.1 N.D. +0.4 +0.1 +0.7
carbon source 2-Deoxy-D-Ribose (C) +0.0 N.D. -0.6 -0.0 +1.6
carbon source L-Histidine (C) +0.1 N.D. -0.2 -0.1 +1.4
carbon source D-Fructose (C) +0.1 N.D. -0.3 -0.1 +1.6
carbon source 2-Deoxy-D-Ribose (C) +0.0 N.D. -0.1 -0.1 +1.6
carbon source D-Glucose (C) +0.1 N.D. +0.1 -0.0 +1.4
carbon source D-Glucose (C) +0.0 N.D. +0.3 +0.0 +1.4
carbon source L-Rhamnose (C) -0.0 N.D. -0.1 -0.0 +1.9
carbon source L-Rhamnose (C) +0.1 N.D. +0.2 -0.1 +2.0
carbon source D-Xylose (C) +0.2 N.D. -0.3 +0.2 +2.1
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QEN71_RS06390
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QEN71_RS06395
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