Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS05965 and QEN71_RS05970 are separated by 210 nucleotidesQEN71_RS05970 and QEN71_RS05975 are separated by 123 nucleotidesQEN71_RS05975 and QEN71_RS05980 are separated by 33 nucleotidesQEN71_RS05980 and QEN71_RS05985 are separated by 86 nucleotides QEN71_RS05965: QEN71_RS05965 - 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN, at 1,321,350 to 1,322,498 _RS05965 QEN71_RS05970: QEN71_RS05970 - helix-turn-helix domain-containing protein, at 1,322,709 to 1,323,812 _RS05970 QEN71_RS05975: QEN71_RS05975 - flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase, at 1,323,936 to 1,325,249 _RS05975 QEN71_RS05980: QEN71_RS05980 - histidine--tRNA ligase, at 1,325,283 to 1,326,623 _RS05980 QEN71_RS05985: QEN71_RS05985 - tetratricopeptide repeat protein, at 1,326,710 to 1,327,336 _RS05985
Group Condition QEN71_RS05965 QEN71_RS05970 QEN71_RS05975 QEN71_RS05980 QEN71_RS05985
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.1 -0.8 N.D. N.D. -1.5
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.0 -1.3 N.D. N.D. -0.7
motility Motility_inner_sample_with_outgrowth -0.6 +0.0 N.D. N.D. -2.1
carbon source casaminos (C) -0.3 -1.0 N.D. N.D. -1.3
motility Motility_outer_sample_with_outgrowth -0.9 +1.5 N.D. N.D. -3.0
motility Motility_outer_sample_with_outgrowth -1.1 +1.1 N.D. N.D. -2.2
motility Motility_inner_sample -0.6 -0.4 N.D. N.D. -1.2
motility Motility_outer_sample_with_outgrowth -1.0 +1.1 N.D. N.D. -2.2
motility Motility_inner_sample -0.6 +0.2 N.D. N.D. -1.7
motility Motility_inner_sample -0.5 -0.0 N.D. N.D. -1.2
motility Motility_outer_sample -0.7 +1.3 N.D. N.D. -2.3
motility Motility_outer_sample -0.7 +1.1 N.D. N.D. -2.0
motility Motility_outer_sample_with_outgrowth -1.0 +1.2 N.D. N.D. -1.8
supernatant Filtered_supernatant_MT183_in_LB +0.1 -0.1 N.D. N.D. -1.4
motility Motility_inner_sample_with_outgrowth -0.6 +0.4 N.D. N.D. -1.2
motility Motility_inner_sample -0.5 +0.5 N.D. N.D. -1.1
coculture Psabiae_ML3b with MT81 -0.3 +0.4 N.D. N.D. -1.1
stress LB_noSalt with Chloride 200 mM +0.5 -0.3 N.D. N.D. -1.0
stress LB_noSalt with Zinc 0.5 mM +0.3 +0.6 N.D. N.D. -1.4
stress LB_noSalt with Chloride 200 mM +0.4 +0.2 N.D. N.D. -1.1
carbon source D-Xylose (C) -0.1 -1.5 N.D. N.D. +1.2
carbon source D-Fructose (C) -0.2 -0.8 N.D. N.D. +0.6
coculture Psabiae_ML3b with MT80 -0.2 +0.8 N.D. N.D. -0.9
carbon source L-Rhamnose (C) +0.0 -1.3 N.D. N.D. +1.1
carbon source D-Glucose (C) -0.3 -0.6 N.D. N.D. +0.9
carbon source L-Histidine (C) -0.6 -0.6 N.D. N.D. +1.3
carbon source D-Fructose (C) -0.2 -0.6 N.D. N.D. +0.9
carbon source D-Sorbitol (C) +0.0 -0.9 N.D. N.D. +1.0
carbon source L-Histidine (C) -0.4 -0.4 N.D. N.D. +1.1
carbon source D,L-Malic Acid (C) +0.2 -1.1 N.D. N.D. +1.2
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