Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS05660 and QEN71_RS05665 overlap by 8 nucleotidesQEN71_RS05665 and QEN71_RS05670 are separated by 165 nucleotidesQEN71_RS05670 and QEN71_RS05675 are separated by 71 nucleotidesQEN71_RS05675 and QEN71_RS05680 are separated by 84 nucleotides QEN71_RS05660: QEN71_RS05660 - hypothetical protein, at 1,251,573 to 1,251,920 _RS05660 QEN71_RS05665: QEN71_RS05665 - type I glutamate--ammonia ligase, at 1,251,913 to 1,253,328 _RS05665 QEN71_RS05670: QEN71_RS05670 - nitrogen regulation protein NR(II), at 1,253,494 to 1,254,636 _RS05670 QEN71_RS05675: QEN71_RS05675 - nitrogen regulation protein NR(I), at 1,254,708 to 1,256,222 _RS05675 QEN71_RS05680: QEN71_RS05680 - exodeoxyribonuclease III, at 1,256,307 to 1,257,083 _RS05680
Group Condition QEN71_RS05660 QEN71_RS05665 QEN71_RS05670 QEN71_RS05675 QEN71_RS05680
stress LB_noSalt with Chloride 200 mM +0.2 N.D. +0.2 -0.1 -3.6
stress LB_noSalt with Chloride 200 mM +0.1 N.D. +0.0 -0.0 -3.2
stress LB_noSalt with Chloride 200 mM +0.3 N.D. +0.1 +0.1 -3.3
stress LB_noSalt with Zinc 0.5 mM -0.5 N.D. -0.3 -0.2 -1.7
stress LB_noSalt with Chloride 200 mM +0.3 N.D. -0.0 -0.0 -2.7
stress LB_noSalt with Zinc 0.5 mM -0.0 N.D. -0.2 -0.2 -1.7
carbon source Fumaric (C) +0.2 N.D. -0.7 -0.5 -0.5
motility Motility_outer_sample -0.1 N.D. +0.1 -0.1 -1.2
motility Motility_inner_sample -0.2 N.D. -0.1 +0.0 -0.9
carbon source D,L-Malic Acid (C) +0.1 N.D. -0.1 -0.1 -1.1
motility Motility_outer_sample_with_outgrowth +0.2 N.D. -0.2 -0.1 -1.1
carbon source D-Glucose (C) +0.1 N.D. -0.3 -0.3 -0.5
carbon source casaminos (C) -0.5 N.D. +0.0 -0.1 -0.5
motility Motility_inner_sample_with_outgrowth +0.1 N.D. -0.4 +0.1 -0.8
carbon source D,L-Malic Acid (C) +0.2 N.D. -0.2 -0.0 -0.9
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 N.D. -0.2 +0.2 -0.6
carbon source Fumaric (C) +0.1 N.D. -0.2 -0.3 -0.4
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 N.D. +0.2 -0.0 -1.2
motility Motility_outer_sample +0.2 N.D. +0.0 +0.0 -0.9
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.5 N.D. -0.3 +0.4 -1.2
carbon source 2-Deoxy-D-Ribose (C) +0.0 N.D. -0.2 +0.2 -0.4
carbon source D,L-Lactate (C) +0.6 N.D. -0.3 -0.2 -0.4
carbon source D-Sorbitol (C) +0.4 N.D. +0.0 -0.0 -0.7
motility Motility_outer_sample_with_outgrowth +0.3 N.D. +0.2 +0.2 -0.7
carbon source D-Fructose (C) -0.1 N.D. +0.4 +0.1 -0.4
carbon source D-Sorbitol (C) +0.4 N.D. -0.1 +0.1 -0.4
carbon source D-Xylose (C) +0.3 N.D. +0.2 +0.0 -0.5
supernatant Filtered_supernatant_MT183_in_LB +0.2 N.D. +0.2 +0.1 -0.4
carbon source L-Aspartic Acid (C) +0.5 N.D. +0.2 +0.1 -0.4
carbon source L-Histidine (C) +0.5 N.D. +0.2 -0.2 -0.0
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QEN71_RS05660
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QEN71_RS05665
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