Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS05610 and QEN71_RS05615 are separated by 237 nucleotidesQEN71_RS05615 and QEN71_RS05620 are separated by 55 nucleotidesQEN71_RS05620 and QEN71_RS05625 are separated by 23 nucleotidesQEN71_RS05625 and QEN71_RS05630 are separated by 79 nucleotides QEN71_RS05610: QEN71_RS05610 - hypothetical protein, at 1,238,437 to 1,238,673 _RS05610 QEN71_RS05615: QEN71_RS05615 - oxidative damage protection protein, at 1,238,911 to 1,239,186 _RS05615 QEN71_RS05620: QEN71_RS05620 - amino-acid N-acetyltransferase, at 1,239,242 to 1,240,621 _RS05620 QEN71_RS05625: QEN71_RS05625 - ATP-dependent RNA helicase HrpA, at 1,240,645 to 1,244,952 _RS05625 QEN71_RS05630: QEN71_RS05630 - YadA-like family protein, at 1,245,032 to 1,246,336 _RS05630
Group Condition QEN71_RS05610 QEN71_RS05615 QEN71_RS05620 QEN71_RS05625 QEN71_RS05630
motility Motility_outer_sample -1.0 -3.7 N.D. -0.3 +0.1
motility Motility_outer_sample_with_outgrowth -0.4 -3.6 N.D. -0.2 +0.1
motility Motility_outer_sample_with_outgrowth -0.2 -3.4 N.D. -0.3 -0.0
motility Motility_outer_sample -0.5 -2.8 N.D. -0.3 -0.1
motility Motility_inner_sample -0.8 -2.6 N.D. -0.1 -0.1
motility Motility_inner_sample_with_outgrowth -0.2 -3.1 N.D. -0.1 -0.0
stress LB_noSalt with Cobalt chloride 0.25 mM +0.1 -3.0 N.D. -0.2 -0.0
motility Motility_outer_sample_with_outgrowth +0.3 -3.1 N.D. -0.3 -0.0
motility Motility_inner_sample -0.1 -2.7 N.D. +0.0 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -3.2 N.D. -0.0 +0.3
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 -2.7 N.D. -0.2 -0.1
motility Motility_outer_sample_with_outgrowth -0.3 -2.1 N.D. -0.2 -0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 -3.1 N.D. -0.1 +0.1
carbon source D-Glucose (C) +0.3 -2.5 N.D. +0.1 -0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 -2.7 N.D. +0.0 +0.1
carbon source L-Leucine (C) -0.6 -1.4 N.D. -0.1 -0.2
carbon source D-Xylose (C) -0.4 -1.9 N.D. +0.1 +0.0
coculture Psabiae_ML3b with MT80 -0.8 -1.4 N.D. -0.0 -0.0
motility Motility_inner_sample -0.0 -2.1 N.D. -0.1 +0.0
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.7 -1.4 N.D. -0.1 +0.1
carbon source D-Fructose (C) -0.5 -1.4 N.D. +0.1 -0.1
carbon source L-Leucine (C) +0.0 -1.8 N.D. -0.0 -0.1
motility Motility_inner_sample_with_outgrowth +0.3 -2.0 N.D. -0.1 -0.0
carbon source D,L-Malic Acid (C) -0.5 -1.2 N.D. +0.0 -0.0
carbon source D-Sorbitol (C) +0.3 -2.1 N.D. +0.1 +0.1
coculture Psabiae_ML3b with MT81 -0.0 -1.6 N.D. -0.0 +0.1
carbon source L-Rhamnose (C) +0.5 -1.1 N.D. +0.2 -0.1
supernatant Filtered_supernatant_MT71_in_LB +0.8 -1.3 N.D. -0.0 +0.2
stress LB_noSalt with Chloride 200 mM -1.2 +1.6 N.D. -0.2 -0.2
stress LB_noSalt with Chloride 200 mM -0.6 +1.2 N.D. -0.3 +0.0
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