Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS04735 and QEN71_RS04740 are separated by 160 nucleotidesQEN71_RS04740 and QEN71_RS04745 are separated by 48 nucleotidesQEN71_RS04745 and QEN71_RS04750 are separated by 73 nucleotidesQEN71_RS04750 and QEN71_RS04755 overlap by 4 nucleotides QEN71_RS04735: QEN71_RS04735 - DUF2214 family protein, at 1,034,527 to 1,034,985 _RS04735 QEN71_RS04740: QEN71_RS04740 - tRNA-Val, at 1,035,146 to 1,035,220 _RS04740 QEN71_RS04745: QEN71_RS04745 - DNA polymerase III subunit epsilon, at 1,035,269 to 1,036,018 _RS04745 QEN71_RS04750: QEN71_RS04750 - ribonuclease HI, at 1,036,092 to 1,036,538 _RS04750 QEN71_RS04755: QEN71_RS04755 - class I SAM-dependent methyltransferase, at 1,036,535 to 1,037,350 _RS04755
Group Condition QEN71_RS04735 QEN71_RS04740 QEN71_RS04745 QEN71_RS04750 QEN71_RS04755
carbon source L-Histidine (C) -0.3 N.D. N.D. N.D. N.D.
carbon source casaminos (C) -0.3 N.D. N.D. N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 N.D. N.D. N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 N.D. N.D. N.D. N.D.
carbon source L-Leucine (C) -0.2 N.D. N.D. N.D. N.D.
motility Motility_outer_sample_with_outgrowth -0.2 N.D. N.D. N.D. N.D.
coculture Psabiae_ML3b with MT80 -0.2 N.D. N.D. N.D. N.D.
carbon source D,L-Lactate (C) -0.2 N.D. N.D. N.D. N.D.
carbon source L-Rhamnose (C) -0.2 N.D. N.D. N.D. N.D.
carbon source D-Sorbitol (C) -0.2 N.D. N.D. N.D. N.D.
carbon source succinate (C) -0.2 N.D. N.D. N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 N.D. N.D. N.D. N.D.
supernatant Filtered_supernatant_MT80_in_LB -0.1 N.D. N.D. N.D. N.D.
carbon source D-Xylose (C) -0.1 N.D. N.D. N.D. N.D.
motility Motility_inner_sample -0.1 N.D. N.D. N.D. N.D.
motility Motility_inner_sample -0.1 N.D. N.D. N.D. N.D.
carbon source Fumaric (C) -0.1 N.D. N.D. N.D. N.D.
carbon source D,L-Malic Acid (C) -0.1 N.D. N.D. N.D. N.D.
stress LB_noSalt with Chloride 200 mM -0.1 N.D. N.D. N.D. N.D.
motility Motility_outer_sample_with_outgrowth -0.1 N.D. N.D. N.D. N.D.
motility Motility_outer_sample_with_outgrowth +0.1 N.D. N.D. N.D. N.D.
supernatant Filtered_supernatant_MT81_in_LB +0.1 N.D. N.D. N.D. N.D.
carbon source L-Glutamic (C) +0.1 N.D. N.D. N.D. N.D.
carbon source D-Fructose (C) +0.1 N.D. N.D. N.D. N.D.
coculture Psabiae_ML3b with MT81 +0.1 N.D. N.D. N.D. N.D.
carbon source succinate (C) +0.2 N.D. N.D. N.D. N.D.
carbon source L-Glutamic (C) +0.2 N.D. N.D. N.D. N.D.
motility Motility_outer_sample_with_outgrowth +0.2 N.D. N.D. N.D. N.D.
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 N.D. N.D. N.D. N.D.
motility Motility_inner_sample +0.3 N.D. N.D. N.D. N.D.
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