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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS04715 and QEN71_RS04720 are separated by 89 nucleotides
QEN71_RS04720 and QEN71_RS04725 are separated by 735 nucleotides
QEN71_RS04725 and QEN71_RS04730 are separated by 234 nucleotides
QEN71_RS04730 and QEN71_RS04735 are separated by 79 nucleotides
QEN71_RS04715: QEN71_RS04715 - alpha,alpha-trehalose-phosphate synthase (UDP-forming), at 1,028,209 to 1,029,639
_RS04715
QEN71_RS04720: QEN71_RS04720 - ABC transporter ATP-binding protein, at 1,029,729 to 1,031,564
_RS04720
QEN71_RS04725: QEN71_RS04725 - glycosyltransferase family 4 protein, at 1,032,300 to 1,033,364
_RS04725
QEN71_RS04730: QEN71_RS04730 - hypothetical protein, at 1,033,599 to 1,034,447
_RS04730
QEN71_RS04735: QEN71_RS04735 - DUF2214 family protein, at 1,034,527 to 1,034,985
_RS04735
Group
Condition
QEN71
_RS04715
QEN71
_RS04720
QEN71
_RS04725
QEN71
_RS04730
QEN71
_RS04735
motility
Motility_outer_sample_with_outgrowth
-3.9
-4.9
-6.4
-0.6
-0.2
motility
Motility_outer_sample
-3.9
-4.7
-6.8
-0.1
-0.0
motility
Motility_outer_sample_with_outgrowth
-3.7
-5.0
-6.3
-0.2
-0.1
motility
Motility_outer_sample_with_outgrowth
-3.3
-5.2
-6.5
-0.4
+0.2
motility
Motility_outer_sample
-3.4
-4.8
-6.3
-0.2
+0.1
motility
Motility_outer_sample_with_outgrowth
-3.5
-4.3
-6.2
-0.3
+0.1
motility
Motility_inner_sample
-0.8
-1.4
-2.1
-0.1
+0.3
motility
Motility_inner_sample
-0.9
-1.4
-1.9
+0.3
+0.1
motility
Motility_inner_sample
-0.7
-1.2
-2.0
+0.3
-0.1
motility
Motility_inner_sample_with_outgrowth
-0.9
-1.4
-1.3
-0.0
-0.0
motility
Motility_inner_sample
-0.9
-1.3
-1.7
+0.2
-0.1
motility
Motility_inner_sample_with_outgrowth
-0.8
-1.2
-1.7
+0.1
-0.1
carbon source
L-Leucine (C)
-0.4
+0.4
+0.6
-0.1
-0.2
carbon source
D-Glucose (C)
-0.4
+0.4
+0.8
-0.5
+0.0
carbon source
L-Leucine (C)
-0.4
+0.4
+0.6
-0.1
+0.0
carbon source
2-Deoxy-D-Ribose (C)
-0.2
+0.5
+0.5
-0.3
-0.0
carbon source
D-Fructose (C)
-0.3
+0.5
+0.8
-0.4
-0.0
carbon source
D-Glucose (C)
-0.3
+0.5
+0.8
-0.3
-0.0
carbon source
2-Deoxy-D-Ribose (C)
-0.3
+0.6
+0.6
-0.1
-0.1
carbon source
L-Rhamnose (C)
-0.2
+0.7
+1.1
-0.4
-0.2
carbon source
D-Fructose (C)
-0.2
+0.5
+0.8
-0.1
+0.1
carbon source
L-Rhamnose (C)
-0.2
+0.6
+1.1
-0.2
+0.0
carbon source
D-Sorbitol (C)
-0.2
+0.9
+1.1
-0.4
-0.0
carbon source
D-Sorbitol (C)
-0.3
+0.8
+1.2
-0.0
-0.2
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.2
+0.4
+1.0
+0.2
-0.3
carbon source
D,L-Malic Acid (C)
-0.1
+0.8
+0.9
+0.1
-0.1
carbon source
D,L-Malic Acid (C)
-0.1
+0.7
+0.8
+0.2
-0.0
carbon source
D-Xylose (C)
-0.2
+1.4
+1.1
-0.5
-0.1
carbon source
L-Histidine (C)
-0.2
+1.8
+1.9
+0.4
-0.3
carbon source
L-Histidine (C)
-0.1
+1.8
+1.9
+0.2
+0.0
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QEN71_RS04725
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