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Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS04660 and QEN71_RS04665 are separated by 109 nucleotides
QEN71_RS04665 and QEN71_RS04670 are separated by 108 nucleotides
QEN71_RS04670 and QEN71_RS04675 are separated by 148 nucleotides
QEN71_RS04675 and QEN71_RS04680 are separated by 66 nucleotides
QEN71_RS04660: QEN71_RS04660 - elongation factor P maturation arginine rhamnosyltransferase EarP, at 1,019,504 to 1,020,685
_RS04660
QEN71_RS04665: QEN71_RS04665 - excinuclease ABC subunit UvrC, at 1,020,795 to 1,023,005
_RS04665
QEN71_RS04670: QEN71_RS04670 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 1,023,114 to 1,023,704
_RS04670
QEN71_RS04675: QEN71_RS04675 - tRNA-Gly, at 1,023,853 to 1,023,928
_RS04675
QEN71_RS04680: QEN71_RS04680 - tRNA-Gly, at 1,023,995 to 1,024,070
_RS04680
Group
Condition
QEN71
_RS04660
QEN71
_RS04665
QEN71
_RS04670
QEN71
_RS04675
QEN71
_RS04680
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
-0.8
N.D.
N.D.
N.D.
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
-0.6
N.D.
N.D.
N.D.
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
-0.5
N.D.
N.D.
N.D.
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
-0.5
N.D.
N.D.
N.D.
carbon source
D,L-Malic Acid (C)
N.D.
-0.4
N.D.
N.D.
N.D.
carbon source
Fumaric (C)
N.D.
-0.4
N.D.
N.D.
N.D.
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
-0.4
N.D.
N.D.
N.D.
carbon source
L-Histidine (C)
N.D.
-0.3
N.D.
N.D.
N.D.
motility
Motility_outer_sample_with_outgrowth
N.D.
-0.3
N.D.
N.D.
N.D.
stress
LB_noSalt with Chloride 200 mM
N.D.
-0.3
N.D.
N.D.
N.D.
carbon source
succinate (C)
N.D.
-0.3
N.D.
N.D.
N.D.
motility
Motility_outer_sample_with_outgrowth
N.D.
-0.3
N.D.
N.D.
N.D.
coculture
Psabiae_ML3b with MT80
N.D.
-0.3
N.D.
N.D.
N.D.
motility
Motility_inner_sample_with_outgrowth
N.D.
-0.3
N.D.
N.D.
N.D.
carbon source
succinate (C)
N.D.
-0.3
N.D.
N.D.
N.D.
supernatant
Filtered_supernatant_MT80_in_LB
N.D.
-0.3
N.D.
N.D.
N.D.
stress
LB_noSalt with Cobalt chloride 0.25 mM
N.D.
-0.3
N.D.
N.D.
N.D.
motility
Motility_outer_sample_with_outgrowth
N.D.
-0.3
N.D.
N.D.
N.D.
carbon source
L-Glutamic (C)
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
L-Glutamic (C)
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
L-Aspartic Acid (C)
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
L-Aspartic Acid (C)
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
L-Histidine (C)
N.D.
-0.2
N.D.
N.D.
N.D.
motility
Motility_inner_sample_with_outgrowth
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
D,L-Lactate (C)
N.D.
-0.2
N.D.
N.D.
N.D.
motility
Motility_inner_sample
N.D.
-0.2
N.D.
N.D.
N.D.
supernatant
Filtered_supernatant_MT183_in_LB
N.D.
-0.2
N.D.
N.D.
N.D.
stress
LB_noSalt with Cobalt chloride 0.25 mM
N.D.
-0.2
N.D.
N.D.
N.D.
motility
Motility_outer_sample
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
casaminos (C)
N.D.
-0.2
N.D.
N.D.
N.D.
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