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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS04465 and QEN71_RS04470 are separated by 71 nucleotides
QEN71_RS04470 and QEN71_RS04475 overlap by 1 nucleotides
QEN71_RS04475 and QEN71_RS04480 are separated by 72 nucleotides
QEN71_RS04480 and QEN71_RS04485 are separated by 91 nucleotides
QEN71_RS04465: QEN71_RS04465 - DNA recombination protein RmuC, at 981,611 to 983,095
_RS04465
QEN71_RS04470: QEN71_RS04470 - GNAT family N-acetyltransferase, at 983,167 to 983,655
_RS04470
QEN71_RS04475: QEN71_RS04475 - hypothetical protein, at 983,655 to 983,930
_RS04475
QEN71_RS04480: QEN71_RS04480 - molybdopterin-binding protein, at 984,003 to 985,298
_RS04480
QEN71_RS04485: QEN71_RS04485 - molybdenum cofactor guanylyltransferase MobA, at 985,390 to 986,004
_RS04485
Group
Condition
QEN71
_RS04465
QEN71
_RS04470
QEN71
_RS04475
QEN71
_RS04480
QEN71
_RS04485
carbon source
D-Sorbitol (C)
-0.1
-0.0
-1.5
-0.3
-1.7
motility
Motility_outer_sample_with_outgrowth
-0.1
-0.0
-1.3
-0.7
-1.4
carbon source
D-Fructose (C)
-0.0
-0.2
-2.7
-0.3
-0.2
carbon source
D-Glucose (C)
-0.0
-0.0
-2.1
-0.4
+0.2
motility
Motility_outer_sample_with_outgrowth
-0.1
+0.0
-1.0
-0.8
-0.3
carbon source
D-Glucose (C)
-0.2
-0.2
-1.5
-0.4
+0.1
stress
LB_noSalt with Chloride 200 mM
-0.2
-0.1
-1.4
-0.4
+0.0
motility
Motility_outer_sample
+0.0
+0.2
-0.9
-1.1
-0.3
carbon source
L-Rhamnose (C)
-0.0
-0.2
-1.2
-0.3
-0.4
motility
Motility_outer_sample_with_outgrowth
-0.1
+0.1
-0.8
-1.1
+0.0
carbon source
D-Xylose (C)
-0.0
-0.1
-1.8
-0.5
+0.5
motility
Motility_outer_sample_with_outgrowth
-0.2
+0.2
-0.6
-0.7
-0.4
motility
Motility_outer_sample
-0.0
+0.1
-0.7
-0.6
-0.5
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.0
+0.1
-0.6
-0.8
-0.3
stress
LB_noSalt with Zinc 0.5 mM
-0.1
-0.0
-1.4
-0.2
+0.0
carbon source
casaminos (C)
-0.1
-0.0
+0.3
-1.1
-0.4
stress
LB_noSalt with Chloride 200 mM
-0.1
-0.0
-0.4
-0.4
-0.3
carbon source
L-Rhamnose (C)
-0.0
-0.1
-0.5
-0.1
-0.6
stress
LB_noSalt with Zinc 0.5 mM
+0.2
-0.1
-0.9
-0.5
+0.1
carbon source
D-Fructose (C)
-0.2
+0.0
-1.4
-0.1
+0.5
motility
Motility_inner_sample
-0.0
+0.1
-0.8
-0.4
-0.1
stress
LB_noSalt with Chloride 200 mM
-0.3
-0.2
+0.2
-0.3
-0.6
carbon source
D,L-Malic Acid (C)
-0.3
+0.0
-0.8
-0.1
+0.2
motility
Motility_inner_sample
-0.2
+0.2
-0.6
-0.2
-0.1
carbon source
2-Deoxy-D-Ribose (C)
-0.1
-0.0
-0.8
-0.2
+0.3
carbon source
D-Sorbitol (C)
+0.1
+0.1
-1.1
-0.1
+0.4
carbon source
L-Histidine (C)
-0.1
+0.2
+0.5
-0.7
-0.5
supernatant
Filtered_supernatant_MT81_in_LB
+0.1
-0.1
+0.3
-0.5
-0.4
carbon source
L-Histidine (C)
+0.1
-0.0
+0.6
-0.7
-0.1
supernatant
Filtered_supernatant_MT71_in_LB
+0.1
+0.1
+0.6
-0.4
+0.4
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