Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS04385 and QEN71_RS04390 are separated by 322 nucleotidesQEN71_RS04390 and QEN71_RS04395 are separated by 47 nucleotidesQEN71_RS04395 and QEN71_RS04400 are separated by 178 nucleotidesQEN71_RS04400 and QEN71_RS04405 are separated by 67 nucleotides QEN71_RS04385: QEN71_RS04385 - RNA-binding S4 domain-containing protein, at 968,634 to 968,852 _RS04385 QEN71_RS04390: QEN71_RS04390 - hypothetical protein, at 969,175 to 969,642 _RS04390 QEN71_RS04395: QEN71_RS04395 - hypothetical protein, at 969,690 to 969,953 _RS04395 QEN71_RS04400: QEN71_RS04400 - ATP-dependent helicase, at 970,132 to 972,336 _RS04400 QEN71_RS04405: QEN71_RS04405 - DUF4088 family protein, at 972,404 to 973,177 _RS04405
Group Condition QEN71_RS04385 QEN71_RS04390 QEN71_RS04395 QEN71_RS04400 QEN71_RS04405
motility Motility_outer_sample_with_outgrowth -0.5 +0.0 N.D. +0.1 -2.7
motility Motility_outer_sample_with_outgrowth +0.0 -0.2 N.D. +0.1 -3.1
motility Motility_outer_sample -0.2 +0.2 N.D. +0.2 -3.2
motility Motility_outer_sample_with_outgrowth -0.2 +0.0 N.D. +0.2 -2.6
motility Motility_outer_sample_with_outgrowth -0.1 +0.5 N.D. +0.1 -2.5
motility Motility_outer_sample +0.1 +0.2 N.D. +0.1 -2.3
motility Motility_inner_sample -0.6 +0.2 N.D. +0.1 -0.7
carbon source L-Rhamnose (C) -0.3 -0.4 N.D. +0.1 -0.2
motility Motility_inner_sample_with_outgrowth -0.0 -0.1 N.D. +0.1 -0.8
carbon source L-Leucine (C) -0.4 -0.3 N.D. -0.0 -0.0
motility Motility_inner_sample -0.3 +0.1 N.D. +0.1 -0.6
carbon source 2-Deoxy-D-Ribose (C) -0.2 -0.3 N.D. +0.0 -0.2
motility Motility_inner_sample -0.1 +0.0 N.D. +0.1 -0.6
motility Motility_inner_sample_with_outgrowth +0.0 +0.2 N.D. -0.0 -0.7
motility Motility_inner_sample +0.1 +0.2 N.D. +0.0 -0.9
carbon source D-Glucose (C) -0.3 -0.2 N.D. +0.0 -0.1
coculture Psabiae_ML3b with MT81 -0.3 -0.1 N.D. -0.0 -0.2
stress LB_noSalt with Cobalt chloride 0.25 mM -0.2 -0.0 N.D. +0.0 -0.3
carbon source succinate (C) -0.4 -0.1 N.D. +0.0 +0.0
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 +0.2 N.D. +0.1 -0.5
carbon source D,L-Lactate (C) -0.2 -0.2 N.D. +0.0 -0.0
carbon source casaminos (C) -0.1 -0.1 N.D. +0.0 -0.3
coculture Psabiae_ML3b with MT80 -0.4 -0.0 N.D. +0.1 -0.0
carbon source Fumaric (C) -0.6 +0.3 N.D. -0.0 -0.1
stress LB_noSalt with Chloride 200 mM -0.4 +0.0 N.D. +0.1 -0.0
supernatant Filtered_supernatant_MT80_in_LB +0.1 -0.3 N.D. -0.0 -0.1
carbon source D-Sorbitol (C) +0.1 -0.4 N.D. -0.1 +0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 +0.0 N.D. +0.1 -0.1
carbon source L-Glutamic (C) -0.3 +0.2 N.D. -0.1 +0.0
stress LB_noSalt with Zinc 0.5 mM +0.5 +0.1 N.D. +0.1 +0.2
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