Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS04130 and QEN71_RS04135 are separated by 317 nucleotidesQEN71_RS04135 and QEN71_RS04140 are separated by 77 nucleotidesQEN71_RS04140 and QEN71_RS04145 are separated by 206 nucleotidesQEN71_RS04145 and QEN71_RS04150 are separated by 31 nucleotides QEN71_RS04130: QEN71_RS04130 - helix-hairpin-helix domain-containing protein, at 914,462 to 914,830 _RS04130 QEN71_RS04135: QEN71_RS04135 - cysteine synthase CysM, at 915,148 to 916,050 _RS04135 QEN71_RS04140: QEN71_RS04140 - lytic murein transglycosylase B, at 916,128 to 917,336 _RS04140 QEN71_RS04145: QEN71_RS04145 - histone deacetylase family protein, at 917,543 to 918,466 _RS04145 QEN71_RS04150: QEN71_RS04150 - enoyl-CoA hydratase, at 918,498 to 919,307 _RS04150
Group Condition QEN71_RS04130 QEN71_RS04135 QEN71_RS04140 QEN71_RS04145 QEN71_RS04150
carbon source L-Histidine (C) -0.2 N.D. -1.2 -0.0 -0.0
carbon source L-Histidine (C) +0.5 N.D. -1.0 -0.0 -0.0
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 N.D. +0.0 -1.5 +0.6
carbon source D-Glucose (C) -0.1 N.D. +0.5 -0.2 -0.3
carbon source 2-Deoxy-D-Ribose (C) +0.2 N.D. +0.5 -0.5 -0.2
carbon source casaminos (C) +0.5 N.D. -0.1 -0.1 -0.2
carbon source D-Sorbitol (C) +0.2 N.D. +0.5 -0.2 -0.4
motility Motility_outer_sample_with_outgrowth +0.0 N.D. -0.1 +0.5 -0.2
carbon source 2-Deoxy-D-Ribose (C) +0.2 N.D. +0.6 -0.5 -0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 N.D. +0.3 -0.2 -0.2
motility Motility_outer_sample_with_outgrowth -0.1 N.D. -0.1 +0.6 -0.1
carbon source D-Glucose (C) +0.3 N.D. +0.5 -0.2 +0.0
motility Motility_inner_sample +0.4 N.D. +0.1 +0.1 -0.1
carbon source D-Xylose (C) +0.4 N.D. +0.3 -0.3 +0.2
carbon source succinate (C) +0.4 N.D. +0.3 +0.2 -0.1
coculture Psabiae_ML3b with MT81 +0.8 N.D. +0.2 -0.0 -0.2
carbon source L-Rhamnose (C) +0.0 N.D. +0.5 -0.1 +0.2
carbon source L-Glutamic (C) +0.7 N.D. +0.1 -0.1 +0.1
carbon source L-Rhamnose (C) +0.3 N.D. +0.6 -0.1 +0.0
carbon source D-Sorbitol (C) +0.5 N.D. +0.4 -0.2 +0.0
carbon source succinate (C) +0.4 N.D. +0.3 +0.2 -0.0
carbon source D,L-Malic Acid (C) +0.2 N.D. +0.7 -0.0 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.7 N.D. +0.3 -0.1 -0.0
carbon source D-Fructose (C) +0.5 N.D. +0.6 -0.0 -0.1
stress LB_noSalt with Cobalt chloride 0.25 mM +0.5 N.D. +0.1 +0.2 +0.1
motility Motility_outer_sample_with_outgrowth +0.6 N.D. -0.2 +0.4 +0.1
carbon source D-Fructose (C) +0.8 N.D. +0.6 -0.2 -0.1
carbon source D,L-Lactate (C) +0.6 N.D. +0.3 +0.1 +0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 N.D. +0.5 -0.3 +0.9
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.7 N.D. +0.5 +0.0 +0.1
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