Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS03975 and QEN71_RS03980 overlap by 4 nucleotidesQEN71_RS03980 and QEN71_RS03985 are separated by 109 nucleotidesQEN71_RS03985 and QEN71_RS03990 are separated by 87 nucleotidesQEN71_RS03990 and QEN71_RS03995 are separated by 9 nucleotides QEN71_RS03975: QEN71_RS03975 - metalloregulator ArsR/SmtB family transcription factor, at 880,688 to 881,032 _RS03975 QEN71_RS03980: QEN71_RS03980 - cation diffusion facilitator family transporter, at 881,029 to 882,126 _RS03980 QEN71_RS03985: QEN71_RS03985 - FAD-dependent monooxygenase, at 882,236 to 883,972 _RS03985 QEN71_RS03990: QEN71_RS03990 - formate dehydrogenase subunit delta, at 884,060 to 884,314 _RS03990 QEN71_RS03995: QEN71_RS03995 - formate dehydrogenase subunit alpha, at 884,324 to 887,263 _RS03995
Group Condition QEN71_RS03975 QEN71_RS03980 QEN71_RS03985 QEN71_RS03990 QEN71_RS03995
stress LB_noSalt with Zinc 0.5 mM +0.2 -3.6 -0.1 -0.7 -0.1
stress LB_noSalt with Cobalt chloride 0.25 mM -0.8 -1.0 -0.0 -0.9 -0.0
stress LB_noSalt with Zinc 0.5 mM +0.6 -2.2 -0.0 -0.7 -0.0
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 -1.1 -0.0 -1.1 -0.1
stress LB_noSalt with Cobalt chloride 0.25 mM -1.1 -0.9 -0.0 -0.1 +0.0
stress LB_noSalt with Chloride 200 mM -0.4 -0.9 +0.1 -0.6 -0.1
carbon source L-Rhamnose (C) -0.6 -0.2 -0.1 -0.6 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.4 -0.1 -0.2 -0.6 -0.2
coculture Psabiae_ML3b with MT81 -0.1 -0.1 -0.1 -1.1 +0.0
carbon source D-Fructose (C) -0.5 -0.2 +0.0 -0.7 +0.0
coculture Psabiae_ML3b with MT80 -1.0 +0.1 -0.0 -0.5 -0.0
carbon source L-Glutamic (C) -0.3 -0.3 -0.1 -0.5 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 -0.5 +0.1 -0.5 -0.1
stress LB_noSalt with Chloride 200 mM -0.8 -0.6 +0.1 +0.2 -0.1
stress LB_noSalt with Chloride 200 mM -0.4 -0.6 -0.0 -0.1 -0.0
carbon source L-Leucine (C) -0.5 -0.3 +0.1 -0.4 +0.0
carbon source D,L-Malic Acid (C) -0.4 -0.4 -0.1 -0.2 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -0.4 -0.1 -0.7 -0.1
carbon source 2-Deoxy-D-Ribose (C) -0.6 -0.0 +0.1 -0.3 -0.1
motility Motility_inner_sample +0.5 -0.5 -0.1 -0.8 -0.1
stress LB_noSalt with Chloride 200 mM -0.7 -0.2 +0.1 +0.0 -0.1
carbon source L-Aspartic Acid (C) -0.5 -0.2 +0.1 -0.2 -0.0
carbon source D-Sorbitol (C) -0.4 +0.2 +0.0 -0.4 -0.1
carbon source L-Histidine (C) -0.4 +0.2 +0.1 -0.3 -0.1
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.7 +0.3 -0.2 +0.2 +0.0
carbon source D-Glucose (C) -0.4 +0.4 -0.1 +0.0 -0.1
carbon source D,L-Malic Acid (C) -0.3 +0.3 +0.0 +0.3 +0.0
motility Motility_outer_sample_with_outgrowth -0.2 +0.2 +0.1 +0.6 +0.0
motility Motility_outer_sample +0.2 +0.5 -0.1 +0.2 +0.0
motility Motility_outer_sample_with_outgrowth +0.3 +0.4 +0.2 +0.4 -0.0
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