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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS03685 and QEN71_RS03690 are separated by 118 nucleotides
QEN71_RS03690 and QEN71_RS03695 are separated by 533 nucleotides
QEN71_RS03695 and QEN71_RS03700 are separated by 408 nucleotides
QEN71_RS03700 and QEN71_RS03705 are separated by 324 nucleotides
QEN71_RS03685: QEN71_RS03685 - transcription elongation factor GreB, at 818,935 to 819,507
_RS03685
QEN71_RS03690: QEN71_RS03690 - porin, at 819,626 to 820,789
_RS03690
QEN71_RS03695: QEN71_RS03695 - hypothetical protein, at 821,323 to 821,565
_RS03695
QEN71_RS03700: QEN71_RS03700 - cold-shock protein, at 821,974 to 822,177
_RS03700
QEN71_RS03705: QEN71_RS03705 - exonuclease domain-containing protein, at 822,502 to 823,680
_RS03705
Group
Condition
QEN71
_RS03685
QEN71
_RS03690
QEN71
_RS03695
QEN71
_RS03700
QEN71
_RS03705
motility
Motility_outer_sample_with_outgrowth
+0.2
-3.6
-0.1
-1.9
+0.2
motility
Motility_outer_sample
+0.3
-3.4
-0.3
-1.4
+0.0
motility
Motility_outer_sample_with_outgrowth
+0.1
-3.3
-0.1
-0.3
-0.1
motility
Motility_outer_sample_with_outgrowth
+0.2
-3.3
-0.3
-0.4
+0.0
motility
Motility_inner_sample
+0.1
-1.4
-0.0
-2.4
+0.1
stress
LB_noSalt with Chloride 200 mM
+0.2
-0.8
-0.2
-2.7
-0.1
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.1
-1.6
-0.0
-1.3
-0.1
motility
Motility_inner_sample_with_outgrowth
+0.2
-1.5
-0.1
-1.4
-0.0
motility
Motility_outer_sample
+0.2
-3.1
-0.1
+0.2
-0.1
motility
Motility_outer_sample_with_outgrowth
+0.2
-2.9
-0.1
-0.0
+0.1
stress
LB_noSalt with Zinc 0.5 mM
+0.1
-1.2
+0.0
-1.5
+0.1
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.1
-1.0
+0.2
-1.5
+0.0
carbon source
casaminos (C)
-0.0
-0.0
+0.1
-2.1
+0.0
stress
LB_noSalt with Zinc 0.5 mM
+0.1
-1.6
+0.3
-0.9
+0.1
motility
Motility_inner_sample
+0.1
-1.3
+0.4
-1.2
-0.0
stress
LB_noSalt with Chloride 200 mM
+0.0
-0.3
+0.2
-1.8
+0.1
stress
LB_noSalt with Cobalt chloride 0.25 mM
+0.1
-1.8
+0.3
+0.5
-0.1
motility
Motility_inner_sample_with_outgrowth
+0.2
-1.5
-0.1
+0.7
-0.0
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.1
-1.0
-0.5
+1.4
+0.0
carbon source
D-Xylose (C)
-0.1
+2.0
+0.2
-2.1
-0.1
carbon source
D-Sorbitol (C)
+0.1
+1.9
+0.0
-1.8
-0.0
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.0
-0.8
+0.2
+1.0
+0.2
supernatant
Filtered_supernatant_MT81_in_LB
+0.0
-0.8
-0.0
+1.5
+0.1
carbon source
L-Histidine (C)
+0.0
+1.5
+0.4
-0.5
+0.2
carbon source
D-Sorbitol (C)
-0.0
+2.2
+0.1
-0.5
+0.0
carbon source
L-Leucine (C)
+0.1
+1.5
+0.3
+0.4
-0.1
carbon source
D-Fructose (C)
+0.1
+1.9
+0.4
-0.2
+0.0
carbon source
L-Leucine (C)
+0.2
+1.4
+0.1
+0.8
-0.0
carbon source
L-Rhamnose (C)
+0.2
+1.8
+0.2
+0.2
+0.1
carbon source
D-Fructose (C)
+0.1
+2.0
+0.3
+0.3
-0.0
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QEN71_RS03695
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