Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS03395 and QEN71_RS03400 are separated by 162 nucleotidesQEN71_RS03400 and QEN71_RS03405 are separated by 247 nucleotidesQEN71_RS03405 and QEN71_RS03410 are separated by 13 nucleotidesQEN71_RS03410 and QEN71_RS03415 are separated by 309 nucleotides QEN71_RS03395: QEN71_RS03395 - LysR family transcriptional regulator, at 755,530 to 756,444 _RS03395 QEN71_RS03400: QEN71_RS03400 - agmatinase, at 756,607 to 757,599 _RS03400 QEN71_RS03405: QEN71_RS03405 - tetratricopeptide repeat-containing glycosyltransferase family protein, at 757,847 to 759,478 _RS03405 QEN71_RS03410: QEN71_RS03410 - putative hydroxymethylpyrimidine transporter CytX, at 759,492 to 760,808 _RS03410 QEN71_RS03415: QEN71_RS03415 - replication-associated recombination protein A, at 761,118 to 762,428 _RS03415
Group Condition QEN71_RS03395 QEN71_RS03400 QEN71_RS03405 QEN71_RS03410 QEN71_RS03415
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 -1.0 +0.0 +0.0 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -1.0 +0.0 +0.0 +0.1
carbon source L-Aspartic Acid (C) -0.3 -0.1 +0.0 -0.4 +0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -0.7 +0.0 +0.1 +0.0
carbon source succinate (C) -0.1 -0.1 +0.1 -0.2 -0.1
stress LB_noSalt with Chloride 200 mM -0.2 +0.0 +0.0 -0.2 -0.0
carbon source D-Sorbitol (C) -0.2 +0.1 -0.1 +0.0 -0.2
supernatant Filtered_supernatant_MT80_in_LB -0.2 -0.2 -0.1 +0.1 -0.1
supernatant Filtered_supernatant_MT183_in_LB -0.1 -0.2 -0.0 +0.1 -0.1
supernatant Filtered_supernatant_MT71_in_LB +0.1 -0.0 -0.2 -0.1 -0.1
carbon source Fumaric (C) -0.0 -0.0 -0.1 +0.2 -0.2
carbon source D,L-Malic Acid (C) +0.1 -0.2 +0.1 -0.1 -0.1
stress LB_noSalt with Chloride 200 mM -0.2 +0.1 +0.1 -0.3 +0.2
carbon source D-Fructose (C) -0.3 +0.1 +0.1 +0.1 -0.1
motility Motility_inner_sample +0.1 -0.2 +0.1 -0.2 +0.0
motility Motility_outer_sample_with_outgrowth -0.1 +0.2 -0.1 -0.1 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 -0.3 +0.1 -0.2 +0.1
carbon source L-Histidine (C) +0.1 +0.0 -0.1 +0.2 -0.1
carbon source D-Xylose (C) -0.2 +0.3 +0.0 +0.1 -0.0
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.0 +0.1 -0.1 +0.1
coculture Psabiae_ML3b with MT80 +0.1 +0.1 +0.1 +0.2 -0.2
motility Motility_outer_sample_with_outgrowth +0.0 -0.0 -0.1 +0.4 -0.1
carbon source L-Rhamnose (C) +0.0 +0.2 +0.1 -0.2 +0.2
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -0.2 +0.3 +0.2 +0.1
motility Motility_inner_sample +0.2 -0.1 +0.0 +0.2 +0.1
motility Motility_outer_sample_with_outgrowth +0.3 +0.0 -0.0 -0.0 +0.1
stress LB_noSalt with Zinc 0.5 mM -0.0 +0.2 -0.1 +0.2 +0.2
carbon source D,L-Malic Acid (C) +0.3 +0.1 +0.1 +0.2 -0.2
motility Motility_outer_sample +0.2 +0.1 +0.0 +0.3 +0.0
stress LB_noSalt with Zinc 0.5 mM +0.1 +0.2 +0.2 -0.0 +0.2
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