Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS03010 and QEN71_RS03015 are separated by 64 nucleotidesQEN71_RS03015 and QEN71_RS03020 are separated by 73 nucleotidesQEN71_RS03020 and QEN71_RS03025 are separated by 149 nucleotidesQEN71_RS03025 and QEN71_RS03030 overlap by 1 nucleotides QEN71_RS03010: QEN71_RS03010 - dUTP diphosphatase, at 672,191 to 672,637 _RS03010 QEN71_RS03015: QEN71_RS03015 - LLM class flavin-dependent oxidoreductase, at 672,702 to 673,706 _RS03015 QEN71_RS03020: QEN71_RS03020 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC, at 673,780 to 675,003 _RS03020 QEN71_RS03025: QEN71_RS03025 - signal peptidase II, at 675,153 to 675,653 _RS03025 QEN71_RS03030: QEN71_RS03030 - isoleucine--tRNA ligase, at 675,653 to 678,490 _RS03030
Group Condition QEN71_RS03010 QEN71_RS03015 QEN71_RS03020 QEN71_RS03025 QEN71_RS03030
carbon source L-Rhamnose (C) N.D. -0.4 N.D. N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.2 N.D. N.D. N.D.
carbon source L-Leucine (C) N.D. -0.2 N.D. N.D. N.D.
carbon source L-Glutamic (C) N.D. -0.2 N.D. N.D. N.D.
carbon source L-Glutamic (C) N.D. -0.2 N.D. N.D. N.D.
carbon source D,L-Malic Acid (C) N.D. -0.2 N.D. N.D. N.D.
carbon source succinate (C) N.D. -0.1 N.D. N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.1 N.D. N.D. N.D.
carbon source D,L-Malic Acid (C) N.D. -0.1 N.D. N.D. N.D.
motility Motility_inner_sample_with_outgrowth N.D. -0.1 N.D. N.D. N.D.
motility Motility_inner_sample N.D. -0.1 N.D. N.D. N.D.
carbon source D-Glucose (C) N.D. -0.1 N.D. N.D. N.D.
stress LB_noSalt with Zinc 0.5 mM N.D. -0.1 N.D. N.D. N.D.
carbon source L-Rhamnose (C) N.D. -0.1 N.D. N.D. N.D.
motility Motility_outer_sample_with_outgrowth N.D. +0.1 N.D. N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.1 N.D. N.D. N.D.
motility Motility_outer_sample_with_outgrowth N.D. +0.1 N.D. N.D. N.D.
motility Motility_outer_sample_with_outgrowth N.D. +0.1 N.D. N.D. N.D.
motility Motility_inner_sample N.D. +0.1 N.D. N.D. N.D.
motility Motility_outer_sample_with_outgrowth N.D. +0.1 N.D. N.D. N.D.
carbon source D,L-Lactate (C) N.D. +0.1 N.D. N.D. N.D.
carbon source D-Fructose (C) N.D. +0.1 N.D. N.D. N.D.
stress LB_noSalt with Cobalt chloride 0.25 mM N.D. +0.1 N.D. N.D. N.D.
motility Motility_inner_sample_with_outgrowth N.D. +0.1 N.D. N.D. N.D.
motility Motility_inner_sample N.D. +0.1 N.D. N.D. N.D.
motility Motility_outer_sample N.D. +0.2 N.D. N.D. N.D.
supernatant Filtered_supernatant_MT183_in_LB N.D. +0.2 N.D. N.D. N.D.
coculture Psabiae_ML3b with MT81 N.D. +0.2 N.D. N.D. N.D.
coculture Psabiae_ML3b with MT80 N.D. +0.3 N.D. N.D. N.D.
stress LB_noSalt with Chloride 200 mM N.D. +0.3 N.D. N.D. N.D.
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