Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS02890 and QEN71_RS02895 are separated by 184 nucleotidesQEN71_RS02895 and QEN71_RS02900 are separated by 33 nucleotidesQEN71_RS02900 and QEN71_RS02905 are separated by 116 nucleotidesQEN71_RS02905 and QEN71_RS02910 are separated by 10 nucleotides QEN71_RS02890: QEN71_RS02890 - PLP-dependent aminotransferase family protein, at 643,726 to 645,138 _RS02890 QEN71_RS02895: QEN71_RS02895 - DUF2917 domain-containing protein, at 645,323 to 645,634 _RS02895 QEN71_RS02900: QEN71_RS02900 - citrate synthase family protein, at 645,668 to 646,900 _RS02900 QEN71_RS02905: QEN71_RS02905 - CoA transferase, at 647,017 to 648,411 _RS02905 QEN71_RS02910: QEN71_RS02910 - GntR family transcriptional regulator, at 648,422 to 649,168 _RS02910
Group Condition QEN71_RS02890 QEN71_RS02895 QEN71_RS02900 QEN71_RS02905 QEN71_RS02910
motility Motility_outer_sample_with_outgrowth -0.1 -0.7 +0.2 -0.5 +0.0
motility Motility_inner_sample -0.1 -0.5 +0.2 -0.1 -0.2
carbon source L-Leucine (C) -0.1 -0.6 +0.2 +0.1 -0.3
coculture Psabiae_ML3b with MT81 -0.2 -0.4 +0.1 +0.0 -0.2
carbon source 2-Deoxy-D-Ribose (C) -0.1 -0.3 +0.3 +0.0 -0.5
carbon source Fumaric (C) -0.1 -0.6 +0.3 -0.2 -0.0
carbon source D,L-Malic Acid (C) -0.1 -0.6 -0.1 -0.0 +0.2
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 -0.2 +0.2 +0.1 -0.5
motility Motility_inner_sample -0.1 -0.3 +0.4 -0.2 -0.2
motility Motility_outer_sample_with_outgrowth -0.0 +0.0 +0.3 -0.5 -0.2
motility Motility_outer_sample_with_outgrowth +0.0 -0.5 +0.6 -0.1 -0.3
carbon source L-Glutamic (C) -0.0 +0.0 +0.3 -0.0 -0.5
carbon source Fumaric (C) -0.1 -0.3 +0.4 -0.1 -0.0
carbon source L-Glutamic (C) +0.0 -0.1 +0.5 -0.1 -0.3
motility Motility_inner_sample_with_outgrowth -0.1 +0.3 +0.3 -0.2 -0.3
motility Motility_outer_sample -0.0 +0.4 +0.3 -0.3 -0.3
motility Motility_inner_sample_with_outgrowth -0.0 +0.3 +0.4 -0.3 -0.4
stress LB_noSalt with Zinc 0.5 mM -0.2 +0.0 +0.4 +0.2 -0.3
carbon source D,L-Lactate (C) +0.0 +0.6 -0.3 +0.1 -0.2
carbon source D-Xylose (C) +0.1 +0.1 +0.3 -0.1 -0.3
carbon source L-Histidine (C) -0.1 +0.5 +0.1 -0.1 -0.3
supernatant Filtered_supernatant_MT183_in_LB +0.0 +0.4 +0.2 -0.2 -0.2
carbon source D,L-Lactate (C) +0.0 +0.3 +0.3 -0.2 -0.1
carbon source D,L-Malic Acid (C) -0.2 +0.5 +0.1 +0.0 +0.2
carbon source L-Rhamnose (C) -0.1 +0.6 +0.3 -0.0 -0.1
stress LB_noSalt with Chloride 200 mM -0.1 +0.5 +0.3 +0.1 -0.1
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 +0.8 +0.2 +0.1 +0.0
motility Motility_inner_sample -0.1 +0.8 +0.3 -0.1 +0.0
carbon source D-Glucose (C) -0.1 +0.2 +0.0 -0.1 +1.6
carbon source D-Glucose (C) +0.0 +0.6 +0.3 +0.0 +1.6
remove
QEN71_RS02890
plot		 remove
QEN71_RS02895
plot		 remove
QEN71_RS02900		 remove
QEN71_RS02905
plot		 remove
QEN71_RS02910
plot