Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS02720 and QEN71_RS02725 are separated by 110 nucleotidesQEN71_RS02725 and QEN71_RS02730 are separated by 168 nucleotidesQEN71_RS02730 and QEN71_RS02735 are separated by 646 nucleotidesQEN71_RS02735 and QEN71_RS02740 overlap by 19 nucleotides QEN71_RS02720: QEN71_RS02720 - thioredoxin, at 610,125 to 610,973 _RS02720 QEN71_RS02725: QEN71_RS02725 - pirin family protein, at 611,084 to 611,965 _RS02725 QEN71_RS02730: QEN71_RS02730 - EamA family transporter, at 612,134 to 613,015 _RS02730 QEN71_RS02735: QEN71_RS02735 - N-acetylmuramoyl-L-alanine amidase, at 613,662 to 615,197 _RS02735 QEN71_RS02740: QEN71_RS02740 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE, at 615,179 to 615,733 _RS02740
Group Condition QEN71_RS02720 QEN71_RS02725 QEN71_RS02730 QEN71_RS02735 QEN71_RS02740
carbon source L-Aspartic Acid (C) -0.2 -0.1 -0.0 N.D. N.D.
carbon source succinate (C) -0.2 -0.2 -0.1 N.D. N.D.
carbon source D,L-Malic Acid (C) -0.3 -0.1 +0.1 N.D. N.D.
carbon source L-Glutamic (C) -0.2 -0.0 -0.1 N.D. N.D.
supernatant Filtered_supernatant_MT80_in_LB -0.1 +0.0 -0.2 N.D. N.D.
carbon source L-Leucine (C) -0.2 -0.1 +0.0 N.D. N.D.
stress LB_noSalt with Zinc 0.5 mM +0.1 -0.2 -0.1 N.D. N.D.
carbon source L-Leucine (C) -0.3 +0.0 +0.1 N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.3 +0.0 +0.2 N.D. N.D.
carbon source L-Aspartic Acid (C) +0.2 -0.1 -0.1 N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.1 -0.0 +0.2 N.D. N.D.
motility Motility_outer_sample -0.1 +0.3 -0.1 N.D. N.D.
carbon source L-Rhamnose (C) -0.1 +0.2 -0.0 N.D. N.D.
carbon source D,L-Malic Acid (C) +0.2 -0.1 +0.1 N.D. N.D.
carbon source L-Histidine (C) +0.0 -0.1 +0.2 N.D. N.D.
carbon source D,L-Lactate (C) +0.2 +0.1 -0.0 N.D. N.D.
carbon source D-Glucose (C) -0.1 +0.3 +0.1 N.D. N.D.
motility Motility_inner_sample_with_outgrowth +0.2 +0.1 +0.0 N.D. N.D.
motility Motility_inner_sample +0.3 -0.0 +0.0 N.D. N.D.
motility Motility_outer_sample_with_outgrowth +0.1 +0.1 +0.1 N.D. N.D.
motility Motility_outer_sample_with_outgrowth +0.1 +0.2 +0.0 N.D. N.D.
carbon source L-Histidine (C) +0.1 +0.2 +0.0 N.D. N.D.
stress LB_noSalt with Cobalt chloride 0.25 mM +0.2 +0.0 +0.1 N.D. N.D.
motility Motility_outer_sample_with_outgrowth -0.0 +0.3 +0.1 N.D. N.D.
coculture Psabiae_ML3b with MT80 +0.2 +0.1 +0.2 N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.0 +0.3 N.D. N.D.
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 +0.0 +0.1 N.D. N.D.
stress LB_noSalt with Chloride 200 mM +0.3 +0.2 -0.0 N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 +0.3 +0.1 N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 +0.2 -0.1 N.D. N.D.
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