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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS02545 and QEN71_RS02550 are separated by 419 nucleotides
QEN71_RS02550 and QEN71_RS02555 are separated by 196 nucleotides
QEN71_RS02555 and QEN71_RS02560 are separated by 12 nucleotides
QEN71_RS02560 and QEN71_RS02565 are separated by 74 nucleotides
QEN71_RS02545: QEN71_RS02545 - nucleobase:cation symporter-2 family protein, at 570,164 to 571,579
_RS02545
QEN71_RS02550: QEN71_RS02550 - FGGY family carbohydrate kinase, at 571,999 to 573,423
_RS02550
QEN71_RS02555: QEN71_RS02555 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase, at 573,620 to 574,726
_RS02555
QEN71_RS02560: QEN71_RS02560 - S-formylglutathione hydrolase, at 574,739 to 575,584
_RS02560
QEN71_RS02565: QEN71_RS02565 - metal ABC transporter permease, at 575,659 to 576,450
_RS02565
Group
Condition
QEN71
_RS02545
QEN71
_RS02550
QEN71
_RS02555
QEN71
_RS02560
QEN71
_RS02565
motility
Motility_outer_sample
-0.1
-0.2
-0.0
+0.2
-3.7
motility
Motility_outer_sample_with_outgrowth
+0.4
-0.1
-0.1
+0.1
-3.8
motility
Motility_outer_sample_with_outgrowth
+0.0
+0.0
-0.0
+0.1
-3.6
motility
Motility_outer_sample_with_outgrowth
-0.1
-0.1
+0.0
+0.2
-3.5
motility
Motility_outer_sample_with_outgrowth
+0.1
-0.2
+0.0
+0.1
-3.1
motility
Motility_outer_sample
+0.4
-0.2
+0.1
+0.1
-2.6
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.3
-0.1
-0.2
+0.2
-1.5
motility
Motility_inner_sample
+0.2
-0.0
+0.1
-0.0
-1.4
motility
Motility_inner_sample
+0.4
-0.1
+0.0
+0.0
-1.4
stress
LB_noSalt with Zinc 0.5 mM
+0.0
-0.1
-0.0
+0.2
-1.0
stress
LB_noSalt with Zinc 0.5 mM
-0.0
-0.1
-0.0
+0.1
-0.8
carbon source
L-Aspartic Acid (C)
+0.1
-0.1
-0.1
+0.1
-0.5
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.4
-0.1
-0.2
-0.0
-0.5
carbon source
Fumaric (C)
+0.0
-0.0
+0.1
+0.1
-0.7
carbon source
D-Glucose (C)
+0.1
-0.2
-0.0
+0.1
-0.4
carbon source
L-Glutamic (C)
+0.3
+0.0
-0.0
-0.0
-0.6
motility
Motility_inner_sample
-0.2
+0.1
+0.2
+0.0
-0.3
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.3
+0.0
+0.0
-0.1
-0.4
carbon source
L-Rhamnose (C)
+0.2
+0.1
-0.2
+0.1
-0.3
motility
Motility_inner_sample
+0.4
-0.1
+0.1
+0.1
-0.6
carbon source
D-Xylose (C)
+0.1
+0.0
+0.2
+0.1
-0.4
motility
Motility_inner_sample_with_outgrowth
+0.2
+0.0
+0.2
+0.1
-0.4
stress
LB_noSalt with Chloride 200 mM
+0.0
-0.2
-0.2
+0.0
+0.5
carbon source
L-Leucine (C)
+0.2
-0.0
+0.1
-0.3
+0.3
supernatant
Filtered_supernatant_MT183_in_LB
+0.1
-0.3
+0.1
+0.0
+0.3
carbon source
L-Rhamnose (C)
+0.4
+0.1
+0.2
+0.1
-0.4
carbon source
D-Sorbitol (C)
+0.2
-0.3
+0.1
+0.0
+0.5
stress
LB_noSalt with Chloride 200 mM
+0.2
-0.2
+0.1
-0.1
+0.7
carbon source
D-Fructose (C)
+0.4
+0.0
-0.0
+0.1
+0.2
stress
LB_noSalt with Cobalt chloride 0.25 mM
+0.2
+0.1
+0.1
+0.1
+0.6
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QEN71_RS02555
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