Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS02450 and QEN71_RS02455 are separated by 12 nucleotidesQEN71_RS02455 and QEN71_RS02460 are separated by 90 nucleotidesQEN71_RS02460 and QEN71_RS02465 are separated by 154 nucleotidesQEN71_RS02465 and QEN71_RS02470 are separated by 198 nucleotides QEN71_RS02450: QEN71_RS02450 - 5-(carboxyamino)imidazole ribonucleotide synthase, at 547,233 to 548,441 _RS02450 QEN71_RS02455: QEN71_RS02455 - L-threonylcarbamoyladenylate synthase, at 548,454 to 549,497 _RS02455 QEN71_RS02460: QEN71_RS02460 - SGNH/GDSL hydrolase family protein, at 549,588 to 550,787 _RS02460 QEN71_RS02465: QEN71_RS02465 - sterol desaturase family protein, at 550,942 to 551,862 _RS02465 QEN71_RS02470: QEN71_RS02470 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase, at 552,061 to 553,740 _RS02470
Group Condition QEN71_RS02450 QEN71_RS02455 QEN71_RS02460 QEN71_RS02465 QEN71_RS02470
carbon source D-Xylose (C) -3.5 N.D. +0.1 -0.1 -0.5
carbon source D-Sorbitol (C) -3.6 N.D. -0.1 -0.1 +0.1
carbon source casaminos (C) -3.3 N.D. -0.0 -0.0 -0.4
carbon source L-Histidine (C) -2.8 N.D. +0.1 -0.1 -0.9
stress LB_noSalt with Chloride 200 mM -3.1 N.D. -0.0 +0.0 -0.4
carbon source L-Leucine (C) -2.8 N.D. +0.1 -0.1 -0.5
carbon source casaminos (C) -2.9 N.D. -0.1 -0.0 -0.3
carbon source succinate (C) -3.4 N.D. +0.1 -0.1 +0.1
motility Motility_outer_sample_with_outgrowth -3.2 N.D. +0.0 -0.1 +0.0
carbon source D-Fructose (C) -3.1 N.D. -0.1 -0.1 +0.0
carbon source Fumaric (C) -3.4 N.D. -0.0 +0.0 +0.2
stress LB_noSalt with Chloride 200 mM -2.8 N.D. -0.0 -0.0 -0.3
carbon source L-Leucine (C) -2.7 N.D. +0.1 -0.0 -0.5
carbon source D-Sorbitol (C) -3.2 N.D. -0.1 -0.1 +0.4
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -3.0 N.D. +0.0 +0.0 +0.0
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -3.1 N.D. +0.0 -0.0 +0.2
carbon source D,L-Lactate (C) -3.0 N.D. +0.0 -0.1 +0.3
carbon source D-Glucose (C) -2.7 N.D. +0.1 -0.1 +0.0
carbon source D,L-Malic Acid (C) -3.2 N.D. -0.1 -0.1 +0.7
carbon source L-Aspartic Acid (C) -2.6 N.D. +0.0 -0.0 -0.1
carbon source L-Rhamnose (C) -2.8 N.D. -0.0 -0.0 +0.2
carbon source D,L-Malic Acid (C) -3.3 N.D. +0.1 -0.0 +0.6
carbon source L-Histidine (C) -1.7 N.D. +0.1 -0.0 -1.0
carbon source Fumaric (C) -2.9 N.D. +0.1 -0.1 +0.3
carbon source L-Rhamnose (C) -2.5 N.D. +0.0 -0.1 +0.1
carbon source D-Fructose (C) -2.4 N.D. -0.0 -0.1 +0.1
carbon source D,L-Lactate (C) -2.3 N.D. -0.1 -0.1 +0.3
motility Motility_inner_sample -2.4 N.D. -0.0 -0.0 +0.3
carbon source succinate (C) -2.6 N.D. +0.2 -0.0 +0.3
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -2.1 N.D. +0.2 -0.0 +0.3
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