Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntQEN71_RS01740 and QEN71_RS01745 are separated by 148 nucleotidesQEN71_RS01745 and QEN71_RS01750 are separated by 293 nucleotidesQEN71_RS01750 and QEN71_RS01755 are separated by 174 nucleotidesQEN71_RS01755 and QEN71_RS01760 are separated by 229 nucleotides QEN71_RS01740: QEN71_RS01740 - HPr(Ser) kinase/phosphatase, at 380,825 to 381,793 _RS01740 QEN71_RS01745: QEN71_RS01745 - PTS sugar transporter subunit IIA, at 381,942 to 382,457 _RS01745 QEN71_RS01750: QEN71_RS01750 - ribosome-associated translation inhibitor RaiA, at 382,751 to 383,110 _RS01750 QEN71_RS01755: QEN71_RS01755 - RNA polymerase factor sigma-54, at 383,285 to 384,802 _RS01755 QEN71_RS01760: QEN71_RS01760 - LPS export ABC transporter ATP-binding protein, at 385,032 to 385,814 _RS01760
Group Condition QEN71_RS01740 QEN71_RS01745 QEN71_RS01750 QEN71_RS01755 QEN71_RS01760
carbon source succinate (C) N.D. -2.9 -0.3 -3.0 N.D.
carbon source Fumaric (C) N.D. -2.2 -0.4 -3.6 N.D.
carbon source Fumaric (C) N.D. -2.8 -0.3 -3.0 N.D.
carbon source D,L-Malic Acid (C) N.D. -2.0 +0.0 -4.0 N.D.
carbon source succinate (C) N.D. -2.4 -0.2 -3.3 N.D.
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -2.9 -0.9 -2.0 N.D.
carbon source D,L-Malic Acid (C) N.D. -1.3 -0.3 -3.8 N.D.
motility Motility_outer_sample_with_outgrowth N.D. -4.7 -0.2 -0.1 N.D.
motility Motility_outer_sample N.D. -4.6 -0.1 -0.1 N.D.
motility Motility_outer_sample_with_outgrowth N.D. -4.5 -0.2 -0.1 N.D.
motility Motility_outer_sample_with_outgrowth N.D. -4.5 -0.1 -0.1 N.D.
motility Motility_outer_sample N.D. -4.6 -0.0 +0.0 N.D.
motility Motility_outer_sample_with_outgrowth N.D. -4.6 -0.0 -0.0 N.D.
motility Motility_inner_sample_with_outgrowth N.D. -4.3 -0.1 +0.2 N.D.
motility Motility_inner_sample_with_outgrowth N.D. -4.3 -0.2 +0.3 N.D.
motility Motility_inner_sample N.D. -4.1 -0.1 +0.2 N.D.
motility Motility_inner_sample N.D. -3.8 -0.2 +0.1 N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -2.9 -0.9 -0.1 N.D.
carbon source D,L-Lactate (C) N.D. -3.4 -0.0 -0.5 N.D.
motility Motility_inner_sample N.D. -3.7 -0.1 +0.0 N.D.
stress LB_noSalt with Cobalt chloride 0.25 mM N.D. -3.3 -0.1 -0.1 N.D.
carbon source D,L-Lactate (C) N.D. -2.8 +0.1 -0.8 N.D.
coculture Psabiae_ML3b with MT81 N.D. -3.0 -0.1 -0.1 N.D.
motility Motility_inner_sample N.D. -3.0 -0.3 +0.1 N.D.
stress LB_noSalt with Cobalt chloride 0.25 mM N.D. -2.8 -0.3 +0.0 N.D.
carbon source casaminos (C) N.D. -2.6 -0.2 +0.3 N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -3.8 -0.5 +1.9 N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -3.1 -0.8 +2.2 N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -2.8 -0.7 +1.9 N.D.
carbon source L-Leucine (C) N.D. -2.3 +0.2 +1.0 N.D.
remove
QEN71_RS01740
plot		 remove
QEN71_RS01745
plot		 remove
QEN71_RS01750		 remove
QEN71_RS01755
plot		 remove
QEN71_RS01760
plot