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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS01495 and QEN71_RS01500 are separated by 44 nucleotides
QEN71_RS01500 and QEN71_RS01505 are separated by 91 nucleotides
QEN71_RS01505 and QEN71_RS01510 are separated by 52 nucleotides
QEN71_RS01510 and QEN71_RS01515 are separated by 38 nucleotides
QEN71_RS01495: QEN71_RS01495 - cytochrome c oxidase subunit II, at 332,546 to 334,255
_RS01495
QEN71_RS01500: QEN71_RS01500 - cytochrome c oxidase subunit I, at 334,300 to 335,913
_RS01500
QEN71_RS01505: QEN71_RS01505 - cytochrome oxidase small assembly protein, at 336,005 to 336,142
_RS01505
QEN71_RS01510: QEN71_RS01510 - cytochrome c oxidase assembly protein, at 336,195 to 336,809
_RS01510
QEN71_RS01515: QEN71_RS01515 - DUF2970 domain-containing protein, at 336,848 to 337,057
_RS01515
Group
Condition
QEN71
_RS01495
QEN71
_RS01500
QEN71
_RS01505
QEN71
_RS01510
QEN71
_RS01515
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-1.7
-2.2
-1.0
-0.8
N.D.
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-1.7
-2.7
-0.5
-0.4
N.D.
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-1.0
-2.7
-0.3
-0.6
N.D.
carbon source
D-Xylose (C)
-1.2
-1.7
-1.0
-0.5
N.D.
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.8
-2.7
-0.5
-0.3
N.D.
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-1.2
-2.5
-0.2
-0.3
N.D.
carbon source
D-Sorbitol (C)
-0.9
-1.3
-0.8
-0.3
N.D.
carbon source
D-Sorbitol (C)
-1.1
-1.2
-0.4
-0.5
N.D.
carbon source
L-Leucine (C)
-0.7
-0.8
-0.4
-0.3
N.D.
carbon source
2-Deoxy-D-Ribose (C)
-0.5
-0.8
-0.4
-0.4
N.D.
carbon source
2-Deoxy-D-Ribose (C)
-0.4
-0.8
-0.5
-0.3
N.D.
carbon source
L-Leucine (C)
-0.6
-0.8
-0.3
-0.2
N.D.
carbon source
L-Rhamnose (C)
-0.0
-0.5
-0.5
-0.2
N.D.
carbon source
D-Glucose (C)
-0.0
-0.5
-0.2
-0.3
N.D.
carbon source
D-Fructose (C)
-0.1
-0.4
-0.3
-0.1
N.D.
carbon source
D-Fructose (C)
-0.1
-0.5
-0.2
-0.0
N.D.
carbon source
L-Histidine (C)
-0.3
-0.3
-0.0
-0.2
N.D.
carbon source
L-Histidine (C)
-0.2
-0.2
-0.3
-0.1
N.D.
motility
Motility_outer_sample_with_outgrowth
-0.9
-0.1
+0.3
-0.0
N.D.
motility
Motility_outer_sample_with_outgrowth
-0.8
-0.0
+0.1
-0.0
N.D.
carbon source
D-Glucose (C)
-0.1
-0.4
+0.0
-0.2
N.D.
motility
Motility_outer_sample_with_outgrowth
-1.0
-0.0
+0.1
+0.2
N.D.
motility
Motility_outer_sample
-0.9
-0.0
+0.4
-0.1
N.D.
motility
Motility_outer_sample_with_outgrowth
-0.8
+0.1
+0.5
+0.1
N.D.
motility
Motility_outer_sample
-0.8
-0.0
+0.6
+0.1
N.D.
motility
Motility_inner_sample_with_outgrowth
+0.2
+0.1
+0.6
-0.1
N.D.
stress
LB_noSalt with Chloride 200 mM
+0.5
+0.0
+0.3
+0.1
N.D.
stress
LB_noSalt with Chloride 200 mM
+0.6
+0.1
+0.4
+0.0
N.D.
stress
LB_noSalt with Chloride 200 mM
+0.7
+0.0
+0.4
-0.1
N.D.
stress
LB_noSalt with Chloride 200 mM
+0.9
+0.1
+0.1
+0.1
N.D.
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QEN71_RS01505
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