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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia sabiae LMG 24235
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
QEN71_RS00925 and QEN71_RS00930 are separated by 60 nucleotides
QEN71_RS00930 and QEN71_RS00935 are separated by 403 nucleotides
QEN71_RS00935 and QEN71_RS00940 are separated by 33 nucleotides
QEN71_RS00940 and QEN71_RS00945 are separated by 600 nucleotides
QEN71_RS00925: QEN71_RS00925 - solute carrier family 23 protein, at 207,483 to 208,790
_RS00925
QEN71_RS00930: QEN71_RS00930 - Na+/H+ antiporter, at 208,851 to 210,515
_RS00930
QEN71_RS00935: QEN71_RS00935 - EAL domain-containing protein, at 210,919 to 212,193
_RS00935
QEN71_RS00940: QEN71_RS00940 - copper homeostasis protein CutC, at 212,227 to 212,916
_RS00940
QEN71_RS00945: QEN71_RS00945 - indolepyruvate ferredoxin oxidoreductase family protein, at 213,517 to 217,110
_RS00945
Group
Condition
QEN71
_RS00925
QEN71
_RS00930
QEN71
_RS00935
QEN71
_RS00940
QEN71
_RS00945
carbon source
L-Glutamic (C)
+0.0
-0.1
-0.4
-0.1
-0.0
supernatant
Filtered_supernatant_MT80_in_LB
-0.1
-0.1
+0.0
-0.3
-0.1
motility
Motility_inner_sample
-0.2
-0.0
+0.1
-0.2
-0.2
stress
LB_noSalt with Chloride 200 mM
-0.3
+0.0
-0.3
+0.0
+0.1
carbon source
D-Fructose (C)
-0.1
+0.0
-0.3
+0.0
-0.1
carbon source
2-Deoxy-D-Ribose (C)
+0.1
+0.0
-0.5
-0.1
-0.0
motility
Motility_outer_sample_with_outgrowth
-0.1
+0.1
+0.1
-0.3
-0.3
motility
Motility_outer_sample_with_outgrowth
-0.2
+0.1
+0.1
-0.1
-0.2
stress
LB_noSalt with Zinc 0.5 mM
+0.1
-0.4
-0.1
-0.1
+0.2
carbon source
casaminos (C)
-0.2
-0.1
+0.2
-0.0
+0.1
stress
LB_noSalt with Chloride 200 mM
-0.1
-0.2
+0.1
-0.2
+0.2
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.1
+0.2
-0.1
-0.1
-0.1
stress
LB_noSalt with Chloride 200 mM
-0.2
+0.0
-0.2
+0.0
+0.2
motility
Motility_inner_sample
+0.1
-0.1
+0.2
-0.1
-0.2
motility
Motility_outer_sample
-0.1
+0.0
+0.4
-0.0
-0.3
motility
Motility_outer_sample_with_outgrowth
-0.1
-0.0
+0.1
+0.2
-0.2
carbon source
L-Rhamnose (C)
-0.1
+0.1
+0.1
+0.1
-0.1
carbon source
L-Aspartic Acid (C)
-0.2
+0.0
+0.3
-0.0
+0.0
carbon source
Fumaric (C)
-0.0
+0.6
-0.1
-0.2
-0.1
carbon source
D-Sorbitol (C)
+0.1
+0.1
+0.0
+0.1
-0.2
carbon source
L-Leucine (C)
-0.0
+0.4
-0.1
+0.0
+0.0
carbon source
Fumaric (C)
-0.1
+0.2
-0.1
+0.2
-0.0
carbon source
succinate (C)
-0.0
+0.1
-0.1
+0.3
+0.0
carbon source
D,L-Malic Acid (C)
-0.0
-0.1
+0.2
+0.2
+0.0
carbon source
D,L-Malic Acid (C)
+0.0
+0.2
+0.3
-0.1
-0.1
in planta
Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.1
+0.1
-0.1
+0.2
+0.0
stress
LB_noSalt with Zinc 0.5 mM
-0.1
-0.2
+0.3
+0.2
+0.2
in planta
Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.1
+0.0
+0.3
+0.1
+0.1
carbon source
D-Xylose (C)
+0.2
+0.1
+0.2
+0.3
-0.1
motility
Motility_outer_sample
+0.1
+0.4
+0.2
-0.0
-0.2
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QEN71_RS00935
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