Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS00230 and QEN71_RS00235 are separated by 128 nucleotidesQEN71_RS00235 and QEN71_RS00240 overlap by 4 nucleotidesQEN71_RS00240 and QEN71_RS00245 are separated by 127 nucleotidesQEN71_RS00245 and QEN71_RS00250 are separated by 380 nucleotides QEN71_RS00230: QEN71_RS00230 - penicillin-binding protein 2, at 47,218 to 49,611 _RS00230 QEN71_RS00235: QEN71_RS00235 - rod shape-determining protein MreD, at 49,740 to 50,252 _RS00235 QEN71_RS00240: QEN71_RS00240 - rod shape-determining protein MreC, at 50,249 to 51,349 _RS00240 QEN71_RS00245: QEN71_RS00245 - rod shape-determining protein, at 51,477 to 52,520 _RS00245 QEN71_RS00250: QEN71_RS00250 - Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC, at 52,901 to 53,200 _RS00250
Group Condition QEN71_RS00230 QEN71_RS00235 QEN71_RS00240 QEN71_RS00245 QEN71_RS00250
carbon source D-Xylose (C) N.D. -4.3 -0.6 N.D. N.D.
carbon source D,L-Malic Acid (C) N.D. -4.5 -0.4 N.D. N.D.
carbon source succinate (C) N.D. -3.0 -0.6 N.D. N.D.
carbon source D,L-Malic Acid (C) N.D. -2.8 -0.7 N.D. N.D.
carbon source L-Rhamnose (C) N.D. -2.9 -0.4 N.D. N.D.
carbon source L-Rhamnose (C) N.D. -2.8 -0.4 N.D. N.D.
carbon source L-Leucine (C) N.D. -2.2 -0.9 N.D. N.D.
carbon source L-Glutamic (C) N.D. -2.8 -0.2 N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -2.7 +0.1 N.D. N.D.
carbon source casaminos (C) N.D. -2.2 -0.5 N.D. N.D.
carbon source D-Fructose (C) N.D. -2.1 -0.4 N.D. N.D.
carbon source L-Aspartic Acid (C) N.D. -1.5 -0.8 N.D. N.D.
stress LB_noSalt with Chloride 200 mM N.D. -1.3 -1.0 N.D. N.D.
carbon source D-Fructose (C) N.D. -1.6 -0.5 N.D. N.D.
carbon source D-Glucose (C) N.D. -1.3 -0.8 N.D. N.D.
carbon source D,L-Lactate (C) N.D. -1.5 -0.6 N.D. N.D.
carbon source L-Histidine (C) N.D. -1.4 -0.6 N.D. N.D.
carbon source Fumaric (C) N.D. -1.7 -0.3 N.D. N.D.
carbon source L-Histidine (C) N.D. -1.1 -0.8 N.D. N.D.
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -1.7 -0.2 N.D. N.D.
carbon source D-Sorbitol (C) N.D. -1.3 -0.6 N.D. N.D.
carbon source Fumaric (C) N.D. -1.6 -0.2 N.D. N.D.
stress LB_noSalt with Chloride 200 mM N.D. -1.0 -0.8 N.D. N.D.
supernatant Filtered_supernatant_MT71_in_LB N.D. -1.2 -0.5 N.D. N.D.
supernatant Filtered_supernatant_MT81_in_LB N.D. -1.3 -0.3 N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -1.3 -0.1 N.D. N.D.
stress LB_noSalt with Zinc 0.5 mM N.D. -1.4 +0.2 N.D. N.D.
motility Motility_outer_sample_with_outgrowth N.D. -1.3 +0.2 N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) N.D. -1.2 +0.2 N.D. N.D.
motility Motility_outer_sample_with_outgrowth N.D. -0.8 +0.7 N.D. N.D.
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