Fitness for 5 genes in Paraburkholderia sabiae LMG 24235

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500 ntQEN71_RS00140 and QEN71_RS00145 are separated by 294 nucleotidesQEN71_RS00145 and QEN71_RS00150 are separated by 54 nucleotidesQEN71_RS00150 and QEN71_RS00155 are separated by 255 nucleotidesQEN71_RS00155 and QEN71_RS00160 are separated by 23 nucleotides QEN71_RS00140: QEN71_RS00140 - DNA topoisomerase III, at 28,551 to 31,211 _RS00140 QEN71_RS00145: QEN71_RS00145 - thioredoxin family protein, at 31,506 to 31,883 _RS00145 QEN71_RS00150: QEN71_RS00150 - DNA-processing protein DprA, at 31,938 to 33,113 _RS00150 QEN71_RS00155: QEN71_RS00155 - peptide deformylase, at 33,369 to 33,872 _RS00155 QEN71_RS00160: QEN71_RS00160 - methionyl-tRNA formyltransferase, at 33,896 to 34,879 _RS00160
Group Condition QEN71_RS00140 QEN71_RS00145 QEN71_RS00150 QEN71_RS00155 QEN71_RS00160
carbon source D-Xylose (C) N.D. N.D. -0.1 N.D. N.D.
carbon source D,L-Malic Acid (C) N.D. N.D. -0.1 N.D. N.D.
motility Motility_inner_sample N.D. N.D. -0.1 N.D. N.D.
carbon source D,L-Malic Acid (C) N.D. N.D. -0.1 N.D. N.D.
carbon source succinate (C) N.D. N.D. +0.1 N.D. N.D.
carbon source casaminos (C) N.D. N.D. +0.1 N.D. N.D.
carbon source L-Rhamnose (C) N.D. N.D. +0.1 N.D. N.D.
stress LB_noSalt with Chloride 200 mM N.D. N.D. +0.1 N.D. N.D.
carbon source L-Rhamnose (C) N.D. N.D. +0.1 N.D. N.D.
carbon source succinate (C) N.D. N.D. +0.1 N.D. N.D.
carbon source L-Histidine (C) N.D. N.D. +0.1 N.D. N.D.
motility Motility_inner_sample_with_outgrowth N.D. N.D. +0.1 N.D. N.D.
motility Motility_outer_sample_with_outgrowth N.D. N.D. +0.1 N.D. N.D.
motility Motility_outer_sample N.D. N.D. +0.1 N.D. N.D.
carbon source D-Sorbitol (C) N.D. N.D. +0.1 N.D. N.D.
carbon source D-Fructose (C) N.D. N.D. +0.1 N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. +0.1 N.D. N.D.
motility Motility_outer_sample N.D. N.D. +0.1 N.D. N.D.
carbon source D,L-Lactate (C) N.D. N.D. +0.1 N.D. N.D.
carbon source L-Glutamic (C) N.D. N.D. +0.1 N.D. N.D.
carbon source D-Glucose (C) N.D. N.D. +0.1 N.D. N.D.
supernatant Filtered_supernatant_MT183_in_LB N.D. N.D. +0.1 N.D. N.D.
in planta Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +0.1 N.D. N.D.
motility Motility_outer_sample_with_outgrowth N.D. N.D. +0.1 N.D. N.D.
carbon source L-Aspartic Acid (C) N.D. N.D. +0.1 N.D. N.D.
carbon source Fumaric (C) N.D. N.D. +0.2 N.D. N.D.
motility Motility_outer_sample_with_outgrowth N.D. N.D. +0.2 N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +0.2 N.D. N.D.
motility Motility_outer_sample_with_outgrowth N.D. N.D. +0.3 N.D. N.D.
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +0.3 N.D. N.D.
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