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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_5086 and Psyr_5087 are separated by 94 nucleotides
Psyr_5087 and Psyr_5088 are separated by 102 nucleotides
Psyr_5088 and Psyr_5089 overlap by 1 nucleotides
Psyr_5089 and Psyr_5090 are separated by 51 nucleotides
Psyr_5086: Psyr_5086 - membrane protein, putative, at 6,034,121 to 6,035,359
_5086
Psyr_5087: Psyr_5087 - Acyltransferase 3, at 6,035,454 to 6,037,337
_5087
Psyr_5088: Psyr_5088 - regulatory protein, LuxR:Response regulator receiver, at 6,037,440 to 6,038,078
_5088
Psyr_5089: Psyr_5089 - ATP-binding region, ATPase-like:Histidine kinase A, N-terminal, at 6,038,078 to 6,039,145
_5089
Psyr_5090: Psyr_5090 - ABC transporter, at 6,039,197 to 6,040,498
_5090
Group
Condition
Psyr
_5086
Psyr
_5087
Psyr
_5088
Psyr
_5089
Psyr
_5090
stress
KB with Chrysophanol 10 mM
-0.0
+0.1
-0.0
-1.0
-0.2
stress
KB with Nalidixic 0.775 ug/ml
-0.1
-0.1
-0.3
-0.4
-0.3
stress
KB with Palmatine chloride 10 mM
-0.2
+0.1
-0.7
-0.2
-0.0
stress
KB with Phloretin 125 ug/ml
-0.1
+0.1
-0.0
-0.7
+0.1
stress
KB with Palmatine 10 mM
-0.0
+0.1
-0.1
-0.6
+0.1
stress
KB with Anethole 10 mM
+0.0
+0.1
-0.3
-0.6
+0.2
stress
KB with Diallyl sulfide 10 mM
-0.0
+0.1
+0.1
-0.7
-0.0
in planta
apoplastic, chopping recovery; Green bean
-0.1
-0.1
+0.5
-0.5
-0.2
stress
KB with Chaulmoogric 10 mM
-0.1
+0.3
+0.2
-0.5
-0.1
kb
KB
-0.1
+0.2
+0.3
-0.7
+0.1
in planta
epiphytic; Lima bean
-0.3
-0.0
-0.3
+0.0
+0.6
stress
KB with d-limonene 10 mM
+0.0
+0.2
-0.3
-0.2
+0.2
stress
KB with Avocadyne 10 mM
+0.1
+0.1
+0.3
-0.3
-0.2
stress
KB with Paclitaxel 10 mM
-0.0
+0.2
-0.1
-0.4
+0.3
stress
KB with Acriflavine 1.25 ug/ml
-0.2
-0.1
+0.3
+0.2
-0.1
stress
KB with Solanesol 10 mM
+0.0
+0.2
+0.3
-0.4
+0.0
stress
KB with Helenine 10 mM
+0.1
+0.2
+0.2
-0.4
+0.1
stress
KB with Prenyletin 10 mM
-0.1
+0.3
+0.3
-0.5
+0.3
stress
KB with Carbenicillin 3.1 ug/ml
-0.2
+0.2
+0.0
-0.2
+0.5
stress
KB with Piperic 10 mM
-0.1
+0.2
+0.1
-0.2
+0.3
stress
KB with Lawsone 10 mM
+0.0
+0.2
+0.3
-0.4
+0.3
stress
KB with Harmine 10 mM
+0.2
+0.1
+0.3
-0.3
+0.2
stress
KB with Biochanin a diacetate 10 mM
-0.0
+0.3
+0.4
-0.2
+0.2
stress
KB with Conessine 10 mM
+0.1
+0.4
+0.1
-0.2
+0.3
in planta
apoplastic; Green bean; 6 days
+0.1
-0.2
+0.3
+0.3
+0.2
in planta
apoplastic; Green bean; 6 days
+0.0
-0.1
-0.1
+0.4
+0.5
in planta
apoplastic, chopping recovery; Green bean
-0.0
+0.0
+0.6
+0.4
-0.1
stress
KB with L-alliin 10 mM
-0.1
+0.2
+0.2
+0.4
+0.2
stress
KB with Harmol 10 mM
+0.1
+0.4
+0.5
-0.6
+0.4
stress
KB with Mitomycin C 0.05 ug/ml
+0.3
+0.1
+0.2
-0.2
+0.5
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